Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0936 ATGGCAAATGCATTGGCCAAGGAGGGATTATCTAAGTCATCTTTTTTGAATGGAAGAAGGCGCACAGTTTGGCTCAACCTCCCTGAGCGGTACAAAGCCGTGATTTCCAACAAAGAAAAGGTCTGCCATTCTTTCTCTCTCCTTCCGCGTGTGAAGTGGCCGTGGATCACTTGCACACCTTCAGCTCCTGAAAAATCTGCAGAAATTGAAGTATTTCTCTTGCATTCAGCTGAATTGAGGCCATTGCATATTTATTGGTTTAAAGAGATGGCAAATCGACTGAAGGAAGATGAGAAAAATGAGCGAATAATTCGAGGTCTTCTCAAACTCCCAGCGAATCGAAGATGTATTAATTGCGACAGTCTGGGGCCACAATACGTGTGCACAAATTTCTCAACGTTTGTTTGCACAAACTGTAGTGGGATACACCGGGAATTTACACATCGAGTAAAGTCAATATCTATGTCCAAGTTCACTTCACAAGAAGTTCTTGCACTTCAGGAAGGAGGAAATCAACATGCAAAAGAAGTTTATTTTAAAGAATGGGACGCGAAAAATCATTCTCTCCCTGATAACAGTAATGTTGGCAGGCTCCGCAACTTTATTAAACAAGTTTATGTGGATAAAAAGTTCACTGATGAGAGGACCTATGACAAATCACAGAGAGGTGACAAGGATCATTTCTCAGAAAACTCGAGAGTTCAATCATATCAGGGTGGTCCAAAAAGCCTTCCATATGAAGAAACACATAAACGCCGGTATAGTGATAGCTCTAGTCTGGGTGGGAGAAGTCCTGGGTATGATCAAGAAAGTTGGCAGTACAGTAATGACAAGAGAAGTCCTAGTCATCCTCCGATTATTAATGATTGGCGTCGAGAAGATAGATTTGGAGATGGAAGGAGGTCTGAAGTTCGTAGAGCATTTGATGGAGATTATAAGCTGGAAGGTCAATTGCCTGGGCAAGCCAACAACCTGGATTCTTCAAGTCCACCTGTGGGTCGGTCTCTTAGAGATATTTTGGGAGAGAATGTGGTGCCTCCTCAAATAAGTAGACCGCCTGAAACAAATAGTAAGAAAGCTAATGATGGCTCAGCTCTCACACAGAGGACTGTATCTTCCAGTAGCTTGGTATCCAGCATTGGAAACCCTGCAGAAGTTAAGCTTGAGACTGCTAAGAGCCTTATTGATTTTGATGCTGAGCCTGAGCCTCCTATAGCTCCAGCAATTCCTCGCGCACAACAACTGATTGCCCAATCCATTGTGGAGCAACCAAATTCCAGCGATGTCAACAATTGGGCCTCTTTTGATGTGGCCCCAGAAGCAAAAGCAACTCAAACTCCTTCAAATGTAAATGCAATAGAATCCATGCTTTCCCAATTGTCAGTATCATCATCATTACCAGCTCATGCTCCTCAAGTCCAACATAGTTCCAGCGTCGTAACACCTATTCCTGGGAGCAGTATGTCATTACAAAGAACTGGGGACCTATTTGTTTCACCTGCTGGGCCTGCACCAGCACCGTCTCTTACTACTACTGCTGTTGGAGCTGCAACTATTAGCAGCTTCACAACTTTTCCATCCAGTGGTGCTTCAGCATGGCAGCATCTGCAGCCTTTGTTCCCTCCCCATGTTAGTCAGTCTCTGACTCATCAATCTACACAACCACCAGTAGGAGCACTGAATAATCAGCCATGGAGTATGCCTTCAGCGCCAACAATACAAGGCCATCCAAGCATGTTATTGCCACACGTGTCCCATCTTATCTCTAAACCTGCAACTGAGACTAGCTCCAGTGCGGCTTCAGGACCGTCTGTAGAAGTAAAATCAGGTGGAACAAAAGAACTTCCCGAGAATCTTTTTACTGTAAAGTATTCTTCCTTCCCTGCCGCAATTCCAGGGTGGCAAATGGTTCCTCCTCATGAAATGGGAATGTCAATGCCATATAATACCGTGTATTCTTCCTTTCCTGCTGCAATTCCTGGGTGGCAAATGGTTCCTCCTCATGGCTTGAGAATGTCAATGCCATATAATACCGTGTCCATGCCAAGTCTTCAGCGACCATCAAAATCAACAAATCCATTTGGTATTGGCAGTGAACCACCTTCAGTTCAAACCACAACTTTTTCCGTGAGACCATCCTTGCCAAGTGTATCAACATCAGGTTTAATGCCTCCTTCAAGCCTAGGTAATCCATCACTTGCGTGGAATCCACCTGGTTACGGATTAGTGCTGCCCCAACAAACACAACCTCATCCACCAGCAATTGCAACAAGGCCTTACATGGGGCAACAAGTGCACACGAACGTGGCAATGCCAAGGTCTGAGGGAGCTGCTTTTGGCTTCTCAAACTTTGATCAGCGTCTGGCCAGTACATTTTCAGCTCCTGCTTCTTCAAATCTCTCTTCTGCAGGAAGGAATCCATTTGGATGA 2430 0.4477 MANALAKEGLSKSSFLNGRRRTVWLNLPERYKAVISNKEKVCHSFSLLPRVKWPWITCTPSAPEKSAEIEVFLLHSAELRPLHIYWFKEMANRLKEDEKNERIIRGLLKLPANRRCINCDSLGPQYVCTNFSTFVCTNCSGIHREFTHRVKSISMSKFTSQEVLALQEGGNQHAKEVYFKEWDAKNHSLPDNSNVGRLRNFIKQVYVDKKFTDERTYDKSQRGDKDHFSENSRVQSYQGGPKSLPYEETHKRRYSDSSSLGGRSPGYDQESWQYSNDKRSPSHPPIINDWRREDRFGDGRRSEVRRAFDGDYKLEGQLPGQANNLDSSSPPVGRSLRDILGENVVPPQISRPPETNSKKANDGSALTQRTVSSSSLVSSIGNPAEVKLETAKSLIDFDAEPEPPIAPAIPRAQQLIAQSIVEQPNSSDVNNWASFDVAPEAKATQTPSNVNAIESMLSQLSVSSSLPAHAPQVQHSSSVVTPIPGSSMSLQRTGDLFVSPAGPAPAPSLTTTAVGAATISSFTTFPSSGASAWQHLQPLFPPHVSQSLTHQSTQPPVGALNNQPWSMPSAPTIQGHPSMLLPHVSHLISKPATETSSSAASGPSVEVKSGGTKELPENLFTVKYSSFPAAIPGWQMVPPHEMGMSMPYNTVYSSFPAAIPGWQMVPPHGLRMSMPYNTVSMPSLQRPSKSTNPFGIGSEPPSVQTTTFSVRPSLPSVSTSGLMPPSSLGNPSLAWNPPGYGLVLPQQTQPHPPAIATRPYMGQQVHTNVAMPRSEGAAFGFSNFDQRLASTFSAPASSNLSSAGRNPFG 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0936 809 MobiDBLite consensus disorder prediction 590 605 - -
Acco01g0936 809 MobiDBLite consensus disorder prediction 349 379 - -
Acco01g0936 809 Gene3D Arf GTPase activating protein 90 223 IPR038508 -
Acco01g0936 809 CDD ArfGap_AGFG 101 213 - -
Acco01g0936 809 MobiDBLite consensus disorder prediction 215 294 - -
Acco01g0936 809 MobiDBLite consensus disorder prediction 258 282 - -
Acco01g0936 809 MobiDBLite consensus disorder prediction 682 723 - -
Acco01g0936 809 Pfam Putative GTPase activating protein for Arf 102 214 IPR001164 GO:0005096
Acco01g0936 809 SUPERFAMILY ArfGap/RecO-like zinc finger 100 213 IPR037278 -
Acco01g0936 809 MobiDBLite consensus disorder prediction 307 379 - -
Acco01g0936 809 MobiDBLite consensus disorder prediction 590 611 - -
Acco01g0936 809 FunFam Arf-GAP domain and FG repeat-containing protein 1 90 223 - -
Acco01g0936 809 PANTHER ARFGAP/RECO-RELATED 90 809 IPR044820 GO:0005096
Acco01g0936 809 PRINTS HIV Rev interacting protein signature 113 132 IPR001164 GO:0005096
Acco01g0936 809 PRINTS HIV Rev interacting protein signature 132 149 IPR001164 GO:0005096
Acco01g0936 809 PRINTS HIV Rev interacting protein signature 150 171 IPR001164 GO:0005096
Acco01g0936 809 MobiDBLite consensus disorder prediction 215 231 - -
Acco01g0936 809 ProSiteProfiles ARF GTPase-activating proteins domain profile. 101 219 IPR001164 GO:0005096
Acco01g0936 809 SMART arf_gap_3 101 219 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0936 Acco-ChrAcco01 11760213 11767409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0936 101 211 C2H2 Transcription Factor Family AT4G05330 33.621 1.76e-11 64.7