Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0932 ATGAGATGGGATAGTCTGCATTTTGATTTATCTGATAGCATAATCGGGAAATTTCAGTGTATGTCTTGTGGGGTTCCCCTTCTTGGTCCTTCAATCATCAATGAGGCAATTTCTGGTGTTCAAAGCCTCTCTTCCAGTGTGCAAAGCACTCCAGGAAAAAATGGTCATTCGGATGATGCTTCAAGAAGTCCTGAACTCCTTCAAGAGTTCTTGAAATCTGGTCCTAAGGAACTTCTTCGAATGTGCTTTTATAAGGACAGAAAGAACATTTTATCAAAAAGAAAAATGCCAGAAACTAAGTCGACCAGCAAGGTTGTCAAGAAACAGGACAGCAAAAAAGTTTCTACTCTCAGCAACCAGCCCTCTAGGAAGCAGCAGAGGAAGAGCAAAAACCCTACAAGGCTCAGGCCAGTTCCTGAACAGCCTTCTGATAATGGACATTCAGACTCCTGGATCTGTAAAAACTCTGCTTGTAGAGCTTTTCTATCTGCAGATGAAAAATTTTGTAGAAGGTGCACTTGCTGTATTTGTCACCTATTTGATAGCAATAAGGATCCTAGCCTTTGGTTGGTATGCTCATCTGAATCTGATGAAGGGGACTCCTGTGGGTTCTCTTGCCATATTGAGTGTGCCCTTCAACATGAAAAAGTAGGAGTTGTTGATCATGGACAACTGATGCAACTAGATGGTGGCTATTGTTGTGCATCCTGTGGTAAAGTTGCAGGGATACTTGGATGTTGGAAGAAGCAGCTAAATATGGCAAAAGATGCTCGGCGAGTTGATGTGCTCTGCTATAGGTTATATTTGAGTTACAAGCTCTTGGATGGGACTTCGAGGTTTAAAGAATTGCATGACATTGTAGTAGAGGCAAAATCAAAGCTAGAAACAGAAGTTGGTCCAGTTAATGGCGTTTCTGCTAAGATGGTGCGAGGCATTGTCAGCAGACTCTCCATTGCCAATGAGGTGCAGAAACTCTGCTCTCTTGCTATTGAGAAAGCTGATGGGTGGCCTTCCGTTGTGAATCCAGATTCCATAGATGGTTTGCTTCCTCCTGCCTGCAAATTTGTTTTCGAAGAGGTAACAGCTTCCTCAGCTAAAATCATTTTGATTGACAAGTCATCTTTTAAGGACATTAAGGGGTACAAGCTCTGGTACTACAAGAGTAATGAGAAGCTGCTTGCAAACGATCCTGTTTGTGAGGTCCCAAATAATCAGAAGAGAATTCTGTTATCCAACCTCCAGCCGGGCACAGAATATACTTTCCGCATTATATCTTACACAGATATGGGTCAGCTTGGTTATTCTGAAGCCAAGTGTTTAACCAAGAATGCTGATCCAACTAAAAAAGTTCCCTCTTCACTAATTGATTTAGGTCGTAAAAAAGAGAACCTTGAAATTGGAGCCAGTTCTTCTGGCTCCAAAACAGAGCCCAATCTTACAGTAGCAGATTCAGGATTTAAGGTTCGAGACCTTGGGAAAGTTGTGGGTCTTGGTTGGGCTCAAGATCAAGGTCCCTTGGAAGGGTTTTGCGGTGTTGATACAAAAAATTGCCTCAAAGAAAGTGAAATGGTCAAGCCTAAACTTTCAGAAGAGCAGCCTGCAGTTTCACGGGGTCTTGATCTAAATGTTGTCTCAGTGCCTGATCTAAATGAAGAACTAGTCCCTCCTTTTGAGTCTTCCAAGGATGAAGATAATGGCTGCACCTTGCAGAAGGCTGTTGAGGCAGACGATGATGCTGCTTCTCGGTTTGCGCAGAGAATCAGTTTAGCCAAATCGCATGGTAGTGGCGACTCCCATACCTGGATGAACGGGCCAACTGGAGAAGTTCCAGCCGTTGACTCCCTTGGAGACGCTTGCAAGAAAAGGGCAGCTAGCACCAATGAAGACACACATGATTGTAATAGCACTTTGGCAAATGGTTCTCCTCTCAGAGTATCAGATGGCACATGCTCACTGGATGAAAACTATGAGTATTGTGTGAAAGTGTTTCGGTGGTTAGAGTGTGAGGGTCACATCAAGCAGGAATTTCGGTTGAAGTTGCTAACATGGTTTAGTTTGAGGTCAACAGAGCAGGAACGCAGGGTGGTCAATACGTTCATTCAAACTCTGCTTGATGATCCATGTAGTTTGGCAGGGCAATTGATCGACTCATTTTCTGATATCATATCCAACAAGAGGCCCAGAAATGCTTAG 2193 0.4341 MRWDSLHFDLSDSIIGKFQCMSCGVPLLGPSIINEAISGVQSLSSSVQSTPGKNGHSDDASRSPELLQEFLKSGPKELLRMCFYKDRKNILSKRKMPETKSTSKVVKKQDSKKVSTLSNQPSRKQQRKSKNPTRLRPVPEQPSDNGHSDSWICKNSACRAFLSADEKFCRRCTCCICHLFDSNKDPSLWLVCSSESDEGDSCGFSCHIECALQHEKVGVVDHGQLMQLDGGYCCASCGKVAGILGCWKKQLNMAKDARRVDVLCYRLYLSYKLLDGTSRFKELHDIVVEAKSKLETEVGPVNGVSAKMVRGIVSRLSIANEVQKLCSLAIEKADGWPSVVNPDSIDGLLPPACKFVFEEVTASSAKIILIDKSSFKDIKGYKLWYYKSNEKLLANDPVCEVPNNQKRILLSNLQPGTEYTFRIISYTDMGQLGYSEAKCLTKNADPTKKVPSSLIDLGRKKENLEIGASSSGSKTEPNLTVADSGFKVRDLGKVVGLGWAQDQGPLEGFCGVDTKNCLKESEMVKPKLSEEQPAVSRGLDLNVVSVPDLNEELVPPFESSKDEDNGCTLQKAVEADDDAASRFAQRISLAKSHGSGDSHTWMNGPTGEVPAVDSLGDACKKRAASTNEDTHDCNSTLANGSPLRVSDGTCSLDENYEYCVKVFRWLECEGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLLDDPCSLAGQLIDSFSDIISNKRPRNA 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0932 730 Pfam PHD - plant homeodomain finger protein 153 271 IPR032881 -
Acco01g0932 730 Gene3D Immunoglobulins 350 453 IPR013783 -
Acco01g0932 730 MobiDBLite consensus disorder prediction 94 111 - -
Acco01g0932 730 Pfam Fibronectin type III domain 375 434 IPR003961 GO:0005515
Acco01g0932 730 ProSiteProfiles Fibronectin type-III domain profile. 350 447 IPR003961 GO:0005515
Acco01g0932 730 MobiDBLite consensus disorder prediction 94 148 - -
Acco01g0932 730 SUPERFAMILY Fibronectin type III 373 448 IPR036116 GO:0005515
Acco01g0932 730 PANTHER VIN3-LIKE PROTEIN 2-RELATED 43 729 IPR044514 GO:0010048|GO:0040029
Acco01g0932 730 MobiDBLite consensus disorder prediction 44 63 - -
Acco01g0932 730 MobiDBLite consensus disorder prediction 112 126 - -
Acco01g0932 730 CDD FN3 377 430 IPR003961 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0932 Acco-ChrAcco01 11682825 11686921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0932 150 730 PHD Gene Family AT3G24440 47.059 3.91e-168 494
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g0932 01 11682825 11686921 Acco01g0932 01 11682825 11686921 ECH