Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0921 ATGATTGATGTAGCGGCTGCTTTGGAGTATCTTCACCATGGTTCTTCTACACTAGTTGTTCATTGTGATGTGAAACCAAGCAATGTTTTGTTGGACAAAGATATGGTGGCTCATCTTTGTGATTTTGGTATTGCTAAATTGTTTGGGGAAAAGCAGTTGGAAATTTATACCAAAACTTTGGCAACAATTGGCTATATGGCACCAGAGTTTGGATCTAAAGGAGTTGTTTCCGCCAAAGGAGATGTGTATAGTTATGGGATTTTGCTAATGGAGATATTTACAAGGAAGAAGCCAACGGATGAAATGTTTGTTCAAGGACTAAGTTTGAAAGATTGGGTGAGCAACTCCACACCACATTCCATCATGAATATTATTGATGTCAATTTGCTACATAGAGAAAATCAAAATACTGATAATATACTACCTTATATGTCATCAATTTTTAAGTTAGCATTACATTGCTCCACTGAATTACCAGAAGCACGACTTAGTATGATTGATGTTGTGGCATCATTAAGAAAAATTAGGTCTTTGTTTATGGAAAATGCTTGA 552 0.3569 MIDVAAALEYLHHGSSTLVVHCDVKPSNVLLDKDMVAHLCDFGIAKLFGEKQLEIYTKTLATIGYMAPEFGSKGVVSAKGDVYSYGILLMEIFTRKKPTDEMFVQGLSLKDWVSNSTPHSIMNIIDVNLLHRENQNTDNILPYMSSIFKLALHCSTELPEARLSMIDVVASLRKIRSLFMENA 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0921 183 SUPERFAMILY Protein kinase-like (PK-like) 1 172 IPR011009 -
Acco01g0921 183 ProSiteProfiles Protein kinase domain profile. 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0921 183 SMART serkin_6 1 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0921 183 Gene3D Transferase(Phosphotransferase) domain 1 1 182 - -
Acco01g0921 183 Pfam Protein kinase domain 2 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0921 183 ProSitePatterns Serine/Threonine protein kinases active-site signature. 19 31 IPR008271 GO:0004672|GO:0006468
Acco01g0921 183 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 1 175 - -
Acco01g0921 183 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0921 Acco-ChrAcco01 11316487 11317285 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0921 2 181 Receptor kinase-like Gene Family AT3G47570 40.860 3.37e-41 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Acco01g0921 Pkinase 2.5e-26 CL0016