Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0904 ATGGCGATGGTAGCCAGAATTGTCCTTATCTTTCTTCTCCTTATGCTTCTTCTGATAATCGTCGTCATCATTTTTGCCTGCAAACCGTGGCGCTTCTTTTCCTCTTCGCGACCCCGCTTATCCATCAAGCTTGTAAAGTTGGAACTTTCCGGGAATTTGGGTTTGATCGACTTGAAAAACTTTCTTGGCTGGCAGCTTTGTAGAACTGATGGTGATATAGAGAGGCCCCTAGTCGCAGATGATGCAAATGCTTTACGTAATCAGAGTGATGAATTTCTGCGAGACTATGATCTTGAGGGTGGTCCTTTTCGCCCATCACTACCACATGGACTTTTTCATAAGCAAAGGCTTCCTGCTTCTTCTCCTAATGTGCCTCAAGATGTAACTTCTGGTGCTTCAGAAGTAGTTGCATTTGGTCAAACACTTAAGCTTCCCCCAGAACAGTTAGCTGCGATTCAAAAGCATAATAGACTGAATCTTGAAGAGGATAGATTGGAAGACACTGTGCAAAGAGATATCTTAGACAAAAGAAGTTGCCTCACTTTGGAGGTTACCAATGGTCCTTCTCTTGGAGCTCATTGTTCTGTACAATCAACAAATCCTTCTCATCTACCTCTGACAATTGGAAGAGTTTCTCCAAGTGATTTACTAATAATGGACTCAGAAGTTTCAGGAAAGCACGCTCTAATAAATTGGAATTTAGATAAATTGAGATGGGAGTTGGTAGATATGGGTAGCCTAAATGGAACACTTTTGAATTCTCGATCAATCAACCATCCAAATGCTAGCAACAGGCGTTGGGGTGAGCCATTTGAAATTGCCGATGGAGATATTATAACTCTTGGAACAACATCAAAAGTCATTGTCCGTATTGCTTCTCAAGCTGAGCATCAAATTCCGTTTGGAGTAGGTATGGCATCAGATCCCATGGCTTTGCGTCGAGGAGGGAAAAAGCTACCTATGGAAGATGTTTGCTATTATCAATGGCCTCTTCCTGGGCTGCATCAGTTTGGACTATTTGGCATCTGTGATGGGCATGGTGGAGATGCGGCTGCTAAATCTGCTAGCAAACTTTTCCCTGAAATAGTTACTCGGATATTATCAGATTCATTAAAAAGAGAGAGTGTTTTATCACTACACGATGCATCTGATGTTCTTAGAGAGGCATTTTCTCAAACAGAAGCAAGCATGAATCACCACTATGAGGGATGTACAGCGACATTGTTTCTGGTGTGGGATGATGGTGATGAAAATTTCTACGCACAATGTGCTAATGTTGGAGACTCTTCCTGTGTTATGAATGTCAATGGGAGACAGATCAATATGACCATAGATCATAAGATAGCAAATTCTTCTGAAAGACTCCGAATTGAAGAGAGCGGTGAGCCATTGAAAGATGGTGAAACACGTCTATACGGTATAAATCTTGCAAGGATGCTTGGGGACAAATTTCTCAAACAACAGGATTCCCGGTTTAGTTCAGAGCCTTTTATAAGTCAAGCAGTGCATATTGATAAAACAAGCAGGGCTTTTGCCATTCTAGCTAGTGATGGCTTGTGGGATGTCATCAGCATGAAGAAGGCAATTCAGCTAGTACTTCAGGTGAGAGACAGATACTCCTCACTAGAGAATTCTGCAGAAAAGGTTGCTAATTTCTTGTTGGGTGAGGCTAGAACTCTCAGAACAAAGGATAATACTTCTGTAATTTTCTTAGATTTTGATAACATCACCAAATACTCTTGTAAATCTGAGTCCTAG 1758 0.4141 MAMVARIVLIFLLLMLLLIIVVIIFACKPWRFFSSSRPRLSIKLVKLELSGNLGLIDLKNFLGWQLCRTDGDIERPLVADDANALRNQSDEFLRDYDLEGGPFRPSLPHGLFHKQRLPASSPNVPQDVTSGASEVVAFGQTLKLPPEQLAAIQKHNRLNLEEDRLEDTVQRDILDKRSCLTLEVTNGPSLGAHCSVQSTNPSHLPLTIGRVSPSDLLIMDSEVSGKHALINWNLDKLRWELVDMGSLNGTLLNSRSINHPNASNRRWGEPFEIADGDIITLGTTSKVIVRIASQAEHQIPFGVGMASDPMALRRGGKKLPMEDVCYYQWPLPGLHQFGLFGICDGHGGDAAAKSASKLFPEIVTRILSDSLKRESVLSLHDASDVLREAFSQTEASMNHHYEGCTATLFLVWDDGDENFYAQCANVGDSSCVMNVNGRQINMTIDHKIANSSERLRIEESGEPLKDGETRLYGINLARMLGDKFLKQQDSRFSSEPFISQAVHIDKTSRAFAILASDGLWDVISMKKAIQLVLQVRDRYSSLENSAEKVANFLLGEARTLRTKDNTSVIFLDFDNITKYSCKSES 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0904 585 Pfam FHA domain 207 282 IPR000253 GO:0005515
Acco01g0904 585 PANTHER PROTEIN PHOSPHATASE 2C 313 570 IPR015655 GO:0004722|GO:0006470
Acco01g0904 585 SUPERFAMILY SMAD/FHA domain 179 289 IPR008984 GO:0005515
Acco01g0904 585 FunFam Protein phosphatase 2C 70 175 309 - -
Acco01g0904 585 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Acco01g0904 585 Gene3D - 310 583 IPR036457 -
Acco01g0904 585 SMART PP2C_4 296 571 IPR001932 -
Acco01g0904 585 Pfam Protein phosphatase 2C 313 566 IPR001932 -
Acco01g0904 585 ProSiteProfiles Forkhead-associated (FHA) domain profile. 206 257 IPR000253 GO:0005515
Acco01g0904 585 Gene3D - 175 309 - -
Acco01g0904 585 ProSitePatterns PPM-type phosphatase domain signature. 339 347 IPR000222 GO:0043169
Acco01g0904 585 ProSiteProfiles PPM-type phosphatase domain profile. 302 573 IPR001932 -
Acco01g0904 585 FunFam Protein phosphatase 2C 70 310 580 - -
Acco01g0904 585 SMART FHA_2 205 257 IPR000253 GO:0005515
Acco01g0904 585 SUPERFAMILY PP2C-like 315 575 IPR036457 -
Acco01g0904 585 CDD PP2Cc 314 573 IPR001932 -
Acco01g0904 585 CDD FHA_PP2C70-like 180 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0904 Acco-ChrAcco01 10944474 10956896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0904 1 574 PP2C-type Phosphatase Gene Family AT5G19280 55.082 0.0 634