Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0894 ATGATGGCTGCTCCTCAACCTCAGTCTCCTTCTCAGGCGGCATCAGGTCTTCCGGCATCATCTTCTTCCTTCCTGAGGGAGCAACAATATACTCACCAGTACATGCATCAGCTTCAGCAACAAGAGCTGCGGCAACAACTCCAGAACTTTTGGGCCAATCAGTACCATGAGATTGAGCAGATTGTTGATTTCAAGAACCATAGCTTGCCTTTAGCTCGGATCAAGAAGATCATGAAGGCTGATGAGGATGTGAGGATGATATCAGCTGAGGCCCCAGTTATATTTGCCAGGGCCTGTGAGATGTTCATCCTGGAGCTAACACTCAGGTCATGGATCAGCGCAGAGGAGAACAAGAGGAGGACACTTCAGAAGAATGACATTGCAGCGGCAATCACAAAGACTGATGTGTTTGATTTCCTGGTTGATATTGTGCCAAGAGATGACTTGAAAGATGATTTGCTCTCAGGTGTTCCTAGAGTCCCACCACCACCAGCAGAGAACGTTCCTTACTACTACATGCCACCTCAACAAGTTGTGGGCCCTCCTCATTCTCCATATGGAGCTCCAAAAGTGATCATGGGTAGGCCTGTTGTTGATCAAGCTCACTATGGTCAGCCATCAGGACACCCTTCTTTCTCTGCACAAGTGTGGCCACACCAGCAAAACCCATCCAACAACAATTCAGATTCTTGA 693 0.4791 MMAAPQPQSPSQAASGLPASSSSFLREQQYTHQYMHQLQQQELRQQLQNFWANQYHEIEQIVDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWISAEENKRRTLQKNDIAAAITKTDVFDFLVDIVPRDDLKDDLLSGVPRVPPPPAENVPYYYMPPQQVVGPPHSPYGAPKVIMGRPVVDQAHYGQPSGHPSFSAQVWPHQQNPSNNNSDS 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0894 230 FunFam Nuclear transcription factor Y subunit gamma 33 146 - -
Acco01g0894 230 MobiDBLite consensus disorder prediction 197 230 - -
Acco01g0894 230 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 68 131 IPR003958 -
Acco01g0894 230 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 28 174 - -
Acco01g0894 230 Gene3D Histone, subunit A 30 146 IPR009072 GO:0046982
Acco01g0894 230 MobiDBLite consensus disorder prediction 206 230 - -
Acco01g0894 230 SUPERFAMILY Histone-fold 40 140 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0894 Acco-ChrAcco01 10811476 10812168 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0894 50 196 CCAAT-HAP5 Transcription Factor Family AT1G08970 69.128 6.84e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Acco01g0894 CBFD_NFYB_HMF 2.3e-17 CL0012