Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0889 ATGGTCTTTGTGCAGCTATATCCAATCTTGTTGTCCCTCTTATTTGCCTTGTTTTCACTTTCTGTACTTGCTCAAACTACCAGTAATATCACTCTAGGAACTTCTCTTACTGCTGGAGAAGATGATTCTTTCAGGGCTTCACCATCCGGTGAATTTGCATTTGGGTTCAAACAAATTGAGGAAGATGGGTTTTTACTAGCAACCTGGTTTAATAGTATACCGGAAGAAACTATTGTTTGGTCAGCCAATGGTCAAAATCTTGCACCAAAGGGTTCTAAAGTTGAGCTCAACTCAAAAGGTTGGTTCCAACTTGTTGATCCTAATGGTAAGCAAATTTGGAATGCAAGTCCTTCAAGAACTGGAGTAGTCGCTTACGCAGCCATGCTTGATTCTGGTAACTTTGTGTTACGTGGACAAGACTCTCAAAATTTGTGGCAGAGCTTTGAGCAACCCACTGACACAATTTTACCAGGACAGGTTCTAAATCAACCAGCTCAACTTGTTGCACGCTATTTGGCAACCAACTATTCAAGAGGAAGATTTCAATTTAATCTACAAGATGATGGGAATCTAGTGCTTTACACAACCTTTTTTCCAACAGATCTTGTGAATTATGCTTATTGGAGTACTCAAGCTTTTGGTACTGGCTTCTCTTTGATCTTCAATCTGTCTGGCTATATAATTTTACGTGCAGAAAATGGAACTATCATTAGTACAATATCATCAAATACTCTGTATTCTACACGAAATTTCTACCAAAGAGCTGTTCTTGATTATGATGGTGTATTTAGGCATTATTACTACCGCAAGAATCGTGGCTCTAGCACTGGAAGCTGGTCAACTTTCTCTGTCACACCTTCAAATATTTGTTTGCGTGTTAATGGAGAGACAGGAAGTGGAGCTTGTGGTTTCAACAGCTATTGTACATTTGATGGCACCAATAAAAGTTGCCAGTGTCCAAATGGTTATAGCTTTATTGATCCAAGTGATGTGATGAAAGGTTGCAAACAGGACTTTGTTTCACAAAGTTGTGATCAAACTTCTAGAGAAACAGATCTCTTTGATTTCATCGAGATGCCCAATATGGATTGGCCATTTTCTGACTCTGAACACTTTGAATCAGTGTCTGAGGATTGGTGCAAACAAGAGTGCCTGGAAGATTGCTTTTGTTCCTCTGTTGTCTTCAGAGATGGAAAATGCTGGAAGAAGAAACAACCTTTCTCTAACGGAAGAGTGGACCCTTCTGTAGGAGGAAAAGCCTTGATCAAAATAAGGAAGGACAATGCTACTTTGATTCCAGAGGATATCAATAGAGACAATGATCGATCAAAGTTGATCATCATAGGTTCCACACTCCTAAGCAGTTCAGTTTTCTTAAACTTGGTTTTGTTGGCAGCAGCTTGTCTGTTTGGATATCGATGTGGCCGCAGTAATCCTAAAGATGATCAAGCTGTCCATTTAACATCAACCATGAACCTTAGAAGTTTCACTTATGAAGAGCTTAGGAAAGGAACAAAAGAGTTCACGGAAGAACTTGGTCGTGGTGCATTTTCTATTGTTTACAAAGGTTTTCTACTTGACACACCAAGAAAACTCATTGCTGTGAAAAAATTGAATATCTTAAAAGGAAGTGAGAAGGAGTTTGAAGCAGAAGTGAGTGCGATTGGTCGAACACATCATAGGAATCTCGTGCAACTGTTGGGATTTTGCAATGAAGGAGAGTATAAGCTACTTGTATATGAATTCATGAGTAGGGGAACTTTAGCCAAGTTTCTTTTTGAAGATCACAGGCCAACTTGGTATCAAAGGGTGGACATAGCAATAGGAATAGCCAAAGGACTCTTGTACCTACATGAAGAATGTAGCACTCAGATCATTCACTGTGATATCAAGCCTCAAAATGTCTTGCTTGATGATTCTTACACCGCCAAGATATCAGATTTTGGTTTGGCAAAGCTATTAAAGATTGATCAAACTGTTACTACAACTGCAATTAGAGGAACTAAAGGCTATGTTGCAGCTGAGTGGTTCAAAAACAAGCCAATTACGATGAAGGTTGATGTTTATAGCTTTGGAGTGTTGTTATTGGAGGTGATTTGTTGCAGAAAGAACTTTGATATGAATGTTGAAGATGAGCATAAGATGGCACTAATAGATTGGGCATATGAGTGCTTTCACCATAGGAGATTGGACCTGTTAGTGGAAGATGATGAGGAAGCTCAAATTGACATGAAGAAGGTAGAAGAGTATGTGAAGATAGGTATATGGTGTATTCAAGAGGATCCATCAGCAAGACCCACTATGAAGCAAGTTGTACAAATGCTTGAAGGATTCATGGATGTGTCAAATCCCCCATATCTATCATCCTTTACTAGTTCATGGTAA 2385 0.3912 MVFVQLYPILLSLLFALFSLSVLAQTTSNITLGTSLTAGEDDSFRASPSGEFAFGFKQIEEDGFLLATWFNSIPEETIVWSANGQNLAPKGSKVELNSKGWFQLVDPNGKQIWNASPSRTGVVAYAAMLDSGNFVLRGQDSQNLWQSFEQPTDTILPGQVLNQPAQLVARYLATNYSRGRFQFNLQDDGNLVLYTTFFPTDLVNYAYWSTQAFGTGFSLIFNLSGYIILRAENGTIISTISSNTLYSTRNFYQRAVLDYDGVFRHYYYRKNRGSSTGSWSTFSVTPSNICLRVNGETGSGACGFNSYCTFDGTNKSCQCPNGYSFIDPSDVMKGCKQDFVSQSCDQTSRETDLFDFIEMPNMDWPFSDSEHFESVSEDWCKQECLEDCFCSSVVFRDGKCWKKKQPFSNGRVDPSVGGKALIKIRKDNATLIPEDINRDNDRSKLIIIGSTLLSSSVFLNLVLLAAACLFGYRCGRSNPKDDQAVHLTSTMNLRSFTYEELRKGTKEFTEELGRGAFSIVYKGFLLDTPRKLIAVKKLNILKGSEKEFEAEVSAIGRTHHRNLVQLLGFCNEGEYKLLVYEFMSRGTLAKFLFEDHRPTWYQRVDIAIGIAKGLLYLHEECSTQIIHCDIKPQNVLLDDSYTAKISDFGLAKLLKIDQTVTTTAIRGTKGYVAAEWFKNKPITMKVDVYSFGVLLLEVICCRKNFDMNVEDEHKMALIDWAYECFHHRRLDLLVEDDEEAQIDMKKVEEYVKIGIWCIQEDPSARPTMKQVVQMLEGFMDVSNPPYLSSFTSSW 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0889 794 Gene3D Transferase(Phosphotransferase) domain 1 583 786 - -
Acco01g0889 794 Pfam Protein kinase domain 509 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0889 794 Pfam D-mannose binding lectin 77 161 IPR001480 -
Acco01g0889 794 FunFam Uncharacterized protein 149 243 - -
Acco01g0889 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Acco01g0889 794 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 24 148 - -
Acco01g0889 794 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 211 IPR036426 -
Acco01g0889 794 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 583 783 - -
Acco01g0889 794 SMART blect_4 35 151 IPR001480 -
Acco01g0889 794 Gene3D - 151 294 - -
Acco01g0889 794 SMART serkin_6 506 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0889 794 ProSiteProfiles Protein kinase domain profile. 506 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0889 794 ProSitePatterns Protein kinases ATP-binding region signature. 512 537 IPR017441 GO:0005524
Acco01g0889 794 FunFam Serine/threonine-protein kinase 152 293 - -
Acco01g0889 794 FunFam S-receptor-like serine/threonine-protein kinase 476 582 - -
Acco01g0889 794 CDD PAN_AP_plant 340 424 - -
Acco01g0889 794 Gene3D Phosphorylase Kinase; domain 1 473 582 - -
Acco01g0889 794 Gene3D - 21 149 IPR036426 -
Acco01g0889 794 SMART ntp_6 351 424 IPR003609 -
Acco01g0889 794 CDD B_lectin 47 151 IPR001480 -
Acco01g0889 794 CDD STKc_IRAK 512 778 - -
Acco01g0889 794 SUPERFAMILY Protein kinase-like (PK-like) 485 776 IPR011009 -
Acco01g0889 794 ProSiteProfiles Bulb-type lectin domain profile. 27 149 IPR001480 -
Acco01g0889 794 PIRSF SRK 1 794 IPR024171 GO:0004674
Acco01g0889 794 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 36 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0889 Acco-ChrAcco01 10687397 10689781 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0889 446 791 Receptor kinase-like Gene Family AT1G56120 40.563 3.37e-68 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco01g0889 Pkinase 4.2e-48 CL0016