Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0888 ATGAGTAGGGGAACTTTAGCAAGTTTCCTTTTTGAAGACCAAAGGCCAAGCTGGTATCAAAGAGTGCAAATTGCAATAGGCATAGCAAAAGGACTTTTATACTTACATGAAGAGTGCAACTCTCAGATCATACACTGTGATATCAAACTTCAAAATGTATTGCTTGATGACACTTGCACGGCTAAAATTGCAGACTTTGGTATCGCAAAACTGTTGAAGATTGACCAGACTGCAACAACAACAGCAATGAGAGGAACTAAAGGGTATGTTGCAGTTGAATGGTTCAAAAACAAGCCAATTACTGTGAAGGTTGATGTTTACAGCTTTGGAGTTTTGTTATTGGAGCTCATTTGTTGTAGAAGGAACTTAGATATGAATGTTGAAGATGAGCATAAGATGGTACTAATAGATTGGGCATATGATTGCTTTCACTATAAGAGATTGGACCTGTTGGTGGAAGATGATGAGGAGGCTCAATTTGACATTAAGAGGGCAGAAGAGTATGTGAAGATTGGTATATGGTGTATTCAAGAAGATCCATCAGCAAGACCCACCATGAAACAAGTTGTACAAATGCTTGAAGGATACATGGATGTGTCAAATCCCCCTTATTTGTCATCCTTTTCTAGTCAAGGGTAA 639 0.385 MSRGTLASFLFEDQRPSWYQRVQIAIGIAKGLLYLHEECNSQIIHCDIKLQNVLLDDTCTAKIADFGIAKLLKIDQTATTTAMRGTKGYVAVEWFKNKPITVKVDVYSFGVLLLELICCRRNLDMNVEDEHKMVLIDWAYDCFHYKRLDLLVEDDEEAQFDIKRAEEYVKIGIWCIQEDPSARPTMKQVVQMLEGYMDVSNPPYLSSFSSQG 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0888 212 SUPERFAMILY Protein kinase-like (PK-like) 1 194 IPR011009 -
Acco01g0888 212 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Acco01g0888 212 SMART serkin_6 1 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0888 212 Pfam Protein kinase domain 6 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0888 212 Gene3D Transferase(Phosphotransferase) domain 1 1 206 - -
Acco01g0888 212 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 201 - -
Acco01g0888 212 ProSiteProfiles Protein kinase domain profile. 1 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0888 212 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0888 Acco-ChrAcco01 10668964 10669602 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0888 1 195 Receptor kinase-like Gene Family AT1G60800 41.709 1.84e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco01g0888 Pkinase 2.8e-31 CL0016