Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0867 ATGATGTCTCATATAACTGTGGAAAGGAACAGGAGAAGACAGATGAACGAACACCTCAAAGTTTTAAGGTCTTTGACCCCTTGCTTCTATATCAAAAGGGGAGACCAAGCATCAATAATAGGGGGAGTAATAGAGTTCATAAAGGAGCTACACCAAGTAGTGGAAGTTCTGGAATCAAAGAAAAGAAGAAAGAGTTTAAGCCATAGTCCAAGAACACCACTACCGCCACCGCCACCGGCAACCACCATGAAGGAGGAGGAATCAGTTGGAGCATCAGCAAGCTGTAATTCTTCAGTTGCAGATGTGCAAGTGAAGATCTCAGGCTCAAACGTGATTCTTAGAGTGATTTCCCACAAAAGAGTAGGTCAAGTTTCAAAAATAATTAGTGTTCTTGAAAGGCTTTCTTTTGAAGTGCTTCATCTCAATATCAGTAGCATGGAGGATACAGTCCTCTACCAATTTGTTGTCAAGATAGGGTTGGAGTGCCAATTAAGCCTGGAGGAACTAGCAGTGGGAGTACAGAAAACTTTCTGCGATCAGAAGATGTTAACTAGCACCGGGTGA 564 0.4255 MMSHITVERNRRRQMNEHLKVLRSLTPCFYIKRGDQASIIGGVIEFIKELHQVVEVLESKKRRKSLSHSPRTPLPPPPPATTMKEEESVGASASCNSSVADVQVKISGSNVILRVISHKRVGQVSKIISVLERLSFEVLHLNISSMEDTVLYQFVVKIGLECQLSLEELAVGVQKTFCDQKMLTSTG 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0867 187 FunFam Transcription factor MUTE 2 68 - -
Acco01g0867 187 Gene3D - 2 67 IPR036638 GO:0046983
Acco01g0867 187 SUPERFAMILY ACT-like 109 168 IPR045865 -
Acco01g0867 187 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 50 IPR011598 GO:0046983
Acco01g0867 187 SMART finulus 5 56 IPR011598 GO:0046983
Acco01g0867 187 Pfam Helix-loop-helix DNA-binding domain 3 50 IPR011598 GO:0046983
Acco01g0867 187 PANTHER TRANSCRIPTION FACTOR FAMA 2 177 IPR044283 GO:0003700|GO:0010052
Acco01g0867 187 MobiDBLite consensus disorder prediction 61 89 - -
Acco01g0867 187 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 2 74 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0867 Acco-ChrAcco01 10348389 10349840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0867 2 187 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 63.235 1.37e-81 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco01g0867 HLH 1.1e-07 No_clan