Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0846 ATGATTAAGTCTCACTGTCAGTTGATGGATAACATTGCTTTGGTGCTAGGAATTACTCGCTTGGTTCCTTCTCAATTGGTACTCGTCTCCCTTGCCATCAGTCTCGGTTACGAAGTTCGCAAGCACTGGCGCCGATTCAGTGAAGATTTTCTGTTCCGAGGTGTAACAATGGTGAGAGTTAGTGTCCTAAACGACGCTCTAAAGAGCATGTACAATGCTGAGAAACGGGGGAAACGTCAGGTCATGATTAGGCCATCCTCTAAAGTGATCATTAAATTTCTTTTGGTGATGCAGAAGCATGGGTACATTGGCGAGTTTGAGTATGTTGATGATCACAGGGCTGGCAAAATTGTTGTTGAATTAAATGGAAGATTAAATAAATGTGGTGTTATTAGTCCCCGTTTTGATGTGGGTGTCAAAGAGATAGAACCTTGGACTGCAAGGCTACTTCCCTCTAGACAGTTTGGCTATATTGTCTTGACTACCTCTGCTGGTATTATGGATCATGAAGAGGCTAGGAGAAAGAATGTTGGTGGTAAAGTGTTGGGTTTCTTTTACTAG 561 0.426 MIKSHCQLMDNIALVLGITRLVPSQLVLVSLAISLGYEVRKHWRRFSEDFLFRGVTMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0846 186 ProSitePatterns Ribosomal protein S8 signature. 156 173 IPR000630 GO:0003735|GO:0005840|GO:0006412
Acco01g0846 186 Gene3D - 126 186 - -
Acco01g0846 186 SUPERFAMILY Ribosomal protein S8 60 186 IPR035987 GO:0003735|GO:0005840|GO:0006412
Acco01g0846 186 Hamap 30S ribosomal protein S8 [rpsH]. 58 186 IPR000630 GO:0003735|GO:0005840|GO:0006412
Acco01g0846 186 FunFam 40S ribosomal protein S15a 126 186 - -
Acco01g0846 186 PANTHER 40S RIBOSOMAL PROTEIN S15A 57 185 IPR000630 GO:0003735|GO:0005840|GO:0006412
Acco01g0846 186 Gene3D - 57 125 - -
Acco01g0846 186 FunFam 40S ribosomal protein S15a 57 125 - -
Acco01g0846 186 Pfam Ribosomal protein S8 63 186 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0846 Acco-ChrAcco01 9962284 9965760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0846 57 186 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 96.923 1.00e-91 262