Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0845 ATGCTGCCTGATCAAAGAAAAAAGTCCTCTGTAGATGTGAACTTCTTCACAGAATATGGTGAAGGGAGCAGATACCGAATAGAGGAAGTAATTGGTAAAGGAAGCTATGGTGTTGTTTGCTCTGCATTAGATACACACACTGGAGAAAAGGTCGCAATAAAGAAAATTAATGACATATTTGAACATGTCTCCGATGCCACACGCATTCTTCGTGAGATTAAGCTTCTTAGGCTCTTGCGTCACCCTGATATTGTGGAGATCAAACATATCTTGTTACCACCTTCTAGGAGAGAATTTAAAGATATATATGTCGTGTTTGAACTCATGGAATCTGATCTACATCAGGTCATCAAAGCAAATGATGATCTGACTCCAGAACACTATCAGTTTTTTCTTTATCAGCTTCTTCGAGGCTTGAAGTACATACACACAGCAAATGTTTTTCACCGAGACCTAAAACCAAAAAATATCTTAGCAAATGCTGACTGCAAACTCAAGATTTGTGACTTTGGTCTTGCCCGAGTAGCATTTAATGATACACCCACTGCCATATTCTGGACGGATTATGTCGCAACAAGGTGGTATAGGGCTCCTGAGCTGTGTGGATCCTTTTTCTCTAAGTACACACCCGCGATAGATATATGGAGCATTGGCTGCATTTTTGCAGAACTTTTAACTGGAAAACCTCTTTTCCCAGGGAAGAATGTTGTCCATCAGTTGGACCTCATGACTGAACTTCTTGGAACACCATCTCCTGAAGCCATTGCTAGGATACGAAATGAGAAAGCCAGGAGATATTTAAGCAGCATGCGAAAGAAGAAGCCAGTTCCTTTCTCGCAAAAGTTTCCTAATGTAGATCCGCTTGCTCTTCGCTTGTTGGAAAGAATGCTGGCATTTGACCCTAAGGATCGGCCTAATGCTGAAGAGGCTTTGGCAGACCCATATTTTAAAGGTTTGGCCAAGGTTGAAAGAGAGCCTTCAGCACATCCAGTTAGCAAGATGGAATTTGAATTTGAGAGACGTAGGATAACAAAGGAGGACATACGAGAGCTCATATATCGAGAAATTCTGGAGTACCATCCGAAGATGTTAAAGGAGTACCTAGAGGGAGCAGAGCCCACAAGTTTTATGTATCCAAGTGCTGTAGACCATTTCAAAAAGCAATTTGCTTATCTTGAGGAGCATTACGGGAAGGGTGGAACTGTTGTGGCGCTTGAGAGGCAGCATGCATCATTACCTAGGCCATGTGTATTATATTCAGATAACTCAATACAAAGTCCAGCTGAGGTTGCAGAGGATCTCTCTAAATGTCGCATCAAAGAAGTTGAGAAGCCGCCACCCATAGAGAGAAACGGGGGCATCCCTTTGACTCGGCTTCCTCAACAGGTTCCACAAAATGTGCAAGGTGCAAGGCCCGGGAAAGTAGTTGGTTCTGTATTGCGTTACAACTGCGGGGTAGCAGCAACAGCGGATGCTTTTGAACAGCAGCGGCAGATGGGTAGAAACCCACCTGTTTCAGCCCAATATGCTGCTTCAAGCTGTTCATATCCCAGAAGAAACCCAGGCTGTAAAAATGAGAGGGCAGAAGATGATGCAATGGAAGGTTCTAATGGGTTGCAACCAAAGCCTCAATATGTGCCCAGAAAAGTTGCTGCTGCTCAAGGTGGAGCTTCTAGCCATTGGTATTGA 1689 0.4364 MLPDQRKKSSVDVNFFTEYGEGSRYRIEEVIGKGSYGVVCSALDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTELLGTPSPEAIARIRNEKARRYLSSMRKKKPVPFSQKFPNVDPLALRLLERMLAFDPKDRPNAEEALADPYFKGLAKVEREPSAHPVSKMEFEFERRRITKEDIRELIYREILEYHPKMLKEYLEGAEPTSFMYPSAVDHFKKQFAYLEEHYGKGGTVVALERQHASLPRPCVLYSDNSIQSPAEVAEDLSKCRIKEVEKPPPIERNGGIPLTRLPQQVPQNVQGARPGKVVGSVLRYNCGVAATADAFEQQRQMGRNPPVSAQYAASSCSYPRRNPGCKNERAEDDAMEGSNGLQPKPQYVPRKVAAAQGGASSHWY 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0845 562 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Acco01g0845 562 FunFam Mitogen-activated protein kinase 14 119 - -
Acco01g0845 562 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Acco01g0845 562 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 340 - -
Acco01g0845 562 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Acco01g0845 562 MobiDBLite consensus disorder prediction 495 519 - -
Acco01g0845 562 FunFam Mitogen-activated protein kinase 111 339 - -
Acco01g0845 562 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0845 562 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Acco01g0845 562 CDD STKc_TDY_MAPK 24 361 - -
Acco01g0845 562 MobiDBLite consensus disorder prediction 495 562 - -
Acco01g0845 562 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Acco01g0845 562 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0845 562 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0845 Acco-ChrAcco01 9931575 9937458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0845 1 562 MAP Kinase Gene Family AT5G19010 79.478 0.0 924
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Acco01g0845 Pkinase 9.3e-68 CL0016