Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0788 ATGGATCGTCTCAGAACTGGCTCTGTTAGGCCATTGCCATTGGTCTCTCTACCTCCGCCTCCTTCTGATGAACCTGTTGTTGCAATGGCCGAGAAGGCGGCAGGGAAAATATCCGGTAAGCGTATTAGAGATTTAGAGAGGACAGAGAGCCTTGTGATTGAGCGTGATCGGAGGTTGAAGATGAATCATATGTTCGCTGAGCTTCAATCCACTGTTCCTGGTCTCTTTTACAAGGCTACAAGGGAAGTGATTGTGAATCAAACAATTAACTACATCAAGGACCTTGAGAAGAAGAAGAAGAGATTGGAAGAGCTTAAGGGGTTAATAATGGAACCAGAAGCAGCTGGAGGGACGCTGATGCTTCCATGTACAAGCAATAAGAATTCCTCCATTACAGTCTCAGTATCTGGAAACATCGCCTTCTTTGGGATTCAATCAAAAGCTCAATTTGGTTTGATCACAGCGATCTTCAAAGTCTTCTACAAGCACAATGCGGAAATTTTGGCTGCAAATGTTTCTGTCGACAATAGAGAATTGACATTGGCAATTACAGCTTCATTACTTCATGATGGTGATAATGGTGGAAATGCTACAGCTGAGAAAATCAGGGGAGAGATTCTGGGTTTGTAG 630 0.4349 MDRLRTGSVRPLPLVSLPPPPSDEPVVAMAEKAAGKISGKRIRDLERTESLVIERDRRLKMNHMFAELQSTVPGLFYKATREVIVNQTINYIKDLEKKKKRLEELKGLIMEPEAAGGTLMLPCTSNKNSSITVSVSGNIAFFGIQSKAQFGLITAIFKVFYKHNAEILAANVSVDNRELTLAITASLLHDGDNGGNATAEKIRGEILGL 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0788 209 Coils Coil 85 105 - -
Acco01g0788 209 MobiDBLite consensus disorder prediction 1 21 - -
Acco01g0788 209 Gene3D - 40 115 IPR036638 GO:0046983
Acco01g0788 209 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 46 200 IPR044278 GO:0003700|GO:0006355|GO:0009960
Acco01g0788 209 SMART finulus 51 101 IPR011598 GO:0046983
Acco01g0788 209 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 47 110 IPR036638 GO:0046983
Acco01g0788 209 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 45 95 IPR011598 GO:0046983
Acco01g0788 209 Pfam Helix-loop-helix DNA-binding domain 52 96 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0788 13 103 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 36.082 2.78e-07 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco01g0788 HLH 2.7e-07 No_clan