Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0775 ATGTTCAAAATCAAGGCACTACTCATGGCTCCATCTAGAAAATCCAAATTTTTCACAAAGAGATATTCAAATATTCGGGAAGCTGTATCTAATGAAGATAAAAATACAGAGAATGTTGGCAAGCCTAGGCCACAGGGTAGTCCTGGAATTCAGAAGAAGAGAAAATTGGCTGACATGTTAGGACCACAATGGAGAAAGGAGGAGCTAGAGCGTTTCTATGAAGCTTACCGTAAATATGGGAAAGACTGGAAGAAGGTGGCTGCTGCAGTGCATAATAGATCTTTGGAAATGGTAGAAGCTCTGTACTCTATGAATCGAGCATACTTGTCTCTTCCAGAGGGCACTGCTTCTGTGGTTGGGCTCATAGCAATGATGACAGATCACTATAGTGTCATGGGAGGAAGTGATAGTGGACAAGAAACCAATGAAGATACAGAAACTTTTAGAAAGCCTCCAAAATTTTTGCGGCAGAAACGTTCAGATGGCAACTATAAAGCATTAGATGGACATTTTTCAGATCATTCTCAGTCACATTCAGTTATATCTGGTGATGGTTGTCTGTCATTGTTGAAGAAGAGTCATTCTGGAATAAGTTCTCATGCTGTTCGCAAAAGAACTCCTCGTGTCCCTGTTTCACATTCCATTCGTAAGGATGTTGGTGAAGAGCGTTTTTCACCTGCTAGGGAACGTTACAGGCCAATGGTTGACGGTAATGATGTTGCTCATAAGATTGCGTTAGCACTGACAGAGGCTTCAAAAATAGGTGGCTCTTCCAAAGTTTCTGACTCACCAAATGATAAATCTAAGGGCATTATGTCATCACCTGGTCAGAATAATGGGAGGAAGAACACTAAATCAGCAGCAGTAGGATCCAAATTTTGCCATTCTGACTTGAATGAGGGTAGCTCTGAAATGAGTTTAGGAAGCAATGGGTGCGGCAGTGGAGATTATTCTGAAAAGCTAGGTCAATGGAGCAGCAGAGAAAGTGCTAGAAGAGGAAAAAATGAAGAAAAAGGAACAAAACACTACCGAAAAAAGTTAGAACTAAAAGAGAATGTGAATAAACATTTGGATGGCGTAAAGGAAGCTTCTAGTGGGACAGACAAAGATGATGGACTGGATTTAATCAAGTATAAAATTGACAATAATTTTGCAGGAACAAAAGGTGCTAGGTCCTCTTTCAAGAGTCTCAGGAAAAAAAGCAAAAAAGTACTGCTTGAAAAAAAGGATGAAGTTCCTTCTTTTGATGCTCTGAAAGCCTTGGCTGATCTATCTTTGATGATGCCAGTGACAAACCCTGACACCGAGACACCTGTTCGGATGATGGAAGAAAACCAAGGAGTTGTTGACGAGTCTAAAGTGGAAACCGATCATGCAATTCTGAGTGATGAAAGCACTGCTTTAACTCAATTGGGTTTGGTTTCTTCTGATAATGGAGTTCTTGTTCCTCAAGAGGAGGGCACCTTCCACCTTGATGCTAGAAAGAGGAAAAGAAGACAAACATCTTCAATATTGAAAGCTACTGGTGACATGGCAAAGTCTGTTGTTAAAGGCAAGGACCCTTCTGTTTTCACACAACAGTCAAGACAACTGAAGGTGGTACAACCCCCAGGAATGAGGTCTTCAAGTAATGATGACAAAGAAGGAGGGGATGATTCATTGCTATTACCCCTAAAAGTTTCATCTACAGATGAAGTAGGTCTAGCAAACAAAAGAAGGCGTAGACGAAAGATGGAAAAACCAAAGCCAATGGTACAAGAAGATAGAAAGGTGTCAGAAAATTTTTTAAGTGGTCAACATAGAAAATCCAGTCTCCAGAACAGTGTATCAAGCCACAAGGAGAAGCTTATTCATTGCCTGTTGTCACATCAAATGCGGCTATGGTGCACTTTTGAGTGGTTTTATAGTGCTATAGATTACCCATGGTTTGCAAAAAGGGAGTTCACGGAGTACTTGGAACATGTTGGATTGGGGCATGTTCCTAGACTGACTCGGATTGAGTGGGGAGTCATTAGAAGTTCTCTTGGCAGACCCCGGAGATTTTCTGAGAAATTTTTGATAGAAGAAAAAACTAAGTTAAATCAATACCGGGACTCAGTTAGAGCACATTATGCAGAACTTCTTGCTGGTACCAGGGATGGCCTTCCAACTGATTTGGCCAGGCCTTTAATTGTTGGACAGCGTGTCCTTGCTATTCACCCAAAGACGAGGGAGATTCATGATGGGAGTATACTAACTGTTGACAACTGTAGGTGTCGGGTTCAGTTTGACCAGCCTGACCTGGGGGTTGAATTAGTCATGGATATTGACTGCATGCCTCAGAATCCACATGAAAATATGCCAGCTTCTCTGATAAGGCGCAATGTGATTCCTGCTGAACTAAATGGAAACCTTATTGAGTTCAAGCTAAACGGGAAACTGCAACAAGGAAAGATGCAGGAAAACGGAATATTGTCCCATAGCGGGAACTTAGATCATGTTGATGCTCTTTATATATCCCCCTCAGCTCATGGCATCAACAATTTATTGAAACAGGGCATTTCGACAAGTTCAAAATTGCAAACAAATGTTGCTTGCAATGAGACTGGTAACATTATGCTGTCAGCAAATTCTAAAGCTTTTTTTCATGAAAATGTCCCATCCAAAGAAGCTGGCAGAAATGCTGTTTTTGAGCTGAATCGCGCTCTTGACAAAAAGGAAATTGTGCTGTCTGAACTGAAGCAAATGAATGATGAGGCATCTGAAAGACGGAAACATGGGGACCACTCTTTAGACGATTCAGAGCCATTTAAGAGGCATTATGCTGCAGTATTGTTGCAGTTAAATGAAGGGAACGAGCAGGTCTCTTCTGCCTTGTTTTGCATGAGACAGCATAACACATATCAGGGGAACTCCTCTAATTTATCACCAAGGCCCGCAGCTAATTCAGATGATCTTGGTGGTCAAGCTAGCTCTTCCTATTGTTCAACTTCTCTCAACCAAAATTGTCGATCTCATATAGCTGAAATTATTGAAAGTTCTAAAAGAAGAGCCTGCAAAATGGTTGGTGCAGCTATGCAGGCAATGTCGTTGTTTACTAAGACAGAAGGTAAGATTGAAGGAATTGAGGAGGCAATTAATTATATAAATAATCGGCTTTCAGTGTATGACCAAGCTGCTCCATCCTCGCAATTCACTCCTACAGACTCTGTTCATGTCACTCTAGCTTGTCAGGATCAGATTATGACTGCAAGTAAATCGAATCCTTTGCCAAATAATCATTCGCAAGATCCTGAACTAAACAGCTCGTCTGATCAAAATGAAGTGAAAATTCCCTCAGAACTTATTTCTCTATGTCTAGCTACATTGTTTACGATCCAGAAGTGCACAGAACGACATTTCCCACCTGCCGACGTTGTACACGTGCTAGATTCTGCAGTCACAAGTTTGCAGCCATTTTGTTCAAAGAATCTTCCAATATATGGGGAGATACAGAAATGCATGGGTATCATCAGGAATCAGATATTGGCGCTCATACCTACCCAAACTACATAG 3534 0.4123 MFKIKALLMAPSRKSKFFTKRYSNIREAVSNEDKNTENVGKPRPQGSPGIQKKRKLADMLGPQWRKEELERFYEAYRKYGKDWKKVAAAVHNRSLEMVEALYSMNRAYLSLPEGTASVVGLIAMMTDHYSVMGGSDSGQETNEDTETFRKPPKFLRQKRSDGNYKALDGHFSDHSQSHSVISGDGCLSLLKKSHSGISSHAVRKRTPRVPVSHSIRKDVGEERFSPARERYRPMVDGNDVAHKIALALTEASKIGGSSKVSDSPNDKSKGIMSSPGQNNGRKNTKSAAVGSKFCHSDLNEGSSEMSLGSNGCGSGDYSEKLGQWSSRESARRGKNEEKGTKHYRKKLELKENVNKHLDGVKEASSGTDKDDGLDLIKYKIDNNFAGTKGARSSFKSLRKKSKKVLLEKKDEVPSFDALKALADLSLMMPVTNPDTETPVRMMEENQGVVDESKVETDHAILSDESTALTQLGLVSSDNGVLVPQEEGTFHLDARKRKRRQTSSILKATGDMAKSVVKGKDPSVFTQQSRQLKVVQPPGMRSSSNDDKEGGDDSLLLPLKVSSTDEVGLANKRRRRRKMEKPKPMVQEDRKVSENFLSGQHRKSSLQNSVSSHKEKLIHCLLSHQMRLWCTFEWFYSAIDYPWFAKREFTEYLEHVGLGHVPRLTRIEWGVIRSSLGRPRRFSEKFLIEEKTKLNQYRDSVRAHYAELLAGTRDGLPTDLARPLIVGQRVLAIHPKTREIHDGSILTVDNCRCRVQFDQPDLGVELVMDIDCMPQNPHENMPASLIRRNVIPAELNGNLIEFKLNGKLQQGKMQENGILSHSGNLDHVDALYISPSAHGINNLLKQGISTSSKLQTNVACNETGNIMLSANSKAFFHENVPSKEAGRNAVFELNRALDKKEIVLSELKQMNDEASERRKHGDHSLDDSEPFKRHYAAVLLQLNEGNEQVSSALFCMRQHNTYQGNSSNLSPRPAANSDDLGGQASSSYCSTSLNQNCRSHIAEIIESSKRRACKMVGAAMQAMSLFTKTEGKIEGIEEAINYINNRLSVYDQAAPSSQFTPTDSVHVTLACQDQIMTASKSNPLPNNHSQDPELNSSSDQNEVKIPSELISLCLATLFTIQKCTERHFPPADVVHVLDSAVTSLQPFCSKNLPIYGEIQKCMGIIRNQILALIPTQTT 1177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0775 1177 Coils Coil 892 916 - -
Acco01g0775 1177 SMART sant 60 108 IPR001005 -
Acco01g0775 1177 MobiDBLite consensus disorder prediction 302 342 - -
Acco01g0775 1177 MobiDBLite consensus disorder prediction 520 542 - -
Acco01g0775 1177 SUPERFAMILY Homeodomain-like 60 106 IPR009057 -
Acco01g0775 1177 MobiDBLite consensus disorder prediction 325 342 - -
Acco01g0775 1177 MobiDBLite consensus disorder prediction 254 288 - -
Acco01g0775 1177 MobiDBLite consensus disorder prediction 29 57 - -
Acco01g0775 1177 MobiDBLite consensus disorder prediction 580 595 - -
Acco01g0775 1177 Pfam DIRP 633 734 IPR033471 -
Acco01g0775 1177 MobiDBLite consensus disorder prediction 493 595 - -
Acco01g0775 1177 MobiDBLite consensus disorder prediction 1079 1099 - -
Acco01g0775 1177 SMART DIRP_2 634 735 IPR033471 -
Acco01g0775 1177 CDD SANT 64 98 IPR001005 -
Acco01g0775 1177 Pfam Myb-like DNA-binding domain 63 98 IPR001005 -
Acco01g0775 1177 PANTHER LIN-9 9 1176 IPR010561 GO:0006351|GO:0017053
Acco01g0775 1177 Gene3D - 5 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0775 Acco-ChrAcco01 8936306 8950837 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco01g0775 DIRP 3e-29 No_clan