Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0743 ATGTGGCAGAATCATCCTCATAAATCTTCTTCTTCTTCTTGTTTAAGAGATTCTATTCTGGCTCTTGAAGCTGATATCCAACATGCCAATACCCTGGCAGCATCACTAGCAGGAGGGTATGGAGGGGACCATATTCAGATGAAATTATCATACAGTCCTTTGGCTCCTTTATTCCTTTATTTGATCCAATGGCTGGATTTCACTTGTACCGACTCCCTACCAACTTCTCTTGGTTTACTCCACATCCTCATTTTCAAGGTGTACGGTGATGGAATACCATCCTTATCCTCCAAAGAAAGAAAAGCATCTCTCAAGGATTTCTACGGTGTAATATACCCATCACTGAGGCAACTTGAAGGGGAGTTTAAAGCAGATGAAGTTAAAGATAACAGAAATAATTGCAGACAAATTGTGAGTAGAAAAAGCTTCAAGAAAGGGTCTGAGAATAAAGAACAAGATTTGATGAGAGACGATGAGTGTGGAATCTGCATGGAGATGAGCATGATCATGGTCCTCCCTGATTGTGGCCACTCTTTGTGTATCACCTGCTTCCATAACTGGAATGTGAGATCAGAGTCATGCCCATTTTGCAGAGGAAGCCTGAAGAGAGTGAGTTCAAGAGATCTATGGGTTAAGATAGACAACAGTGAAGTAGTTGATAGACTCACACTTGCAAAAGACAACCTCACACGCCTCTATCTTTACATTGACTCACTCCCTCTTCTTGCTCACCACCACGATGCTCATGTCTTCCTCTTCAGCTATATGCTTTAA 774 0.4173 MWQNHPHKSSSSSCLRDSILALEADIQHANTLAASLAGGYGGDHIQMKLSYSPLAPLFLYLIQWLDFTCTDSLPTSLGLLHILIFKVYGDGIPSLSSKERKASLKDFYGVIYPSLRQLEGEFKADEVKDNRNNCRQIVSRKSFKKGSENKEQDLMRDDECGICMEMSMIMVLPDCGHSLCITCFHNWNVRSESCPFCRGSLKRVSSRDLWVKIDNSEVVDRLTLAKDNLTRLYLYIDSLPLLAHHHDAHVFLFSYML 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0743 257 SMART ring_2 160 197 IPR001841 -
Acco01g0743 257 FunFam RING/U-box superfamily protein 140 207 - -
Acco01g0743 257 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 116 224 IPR013083 -
Acco01g0743 257 SUPERFAMILY RING/U-box 152 203 - -
Acco01g0743 257 PANTHER RING FINGER PROTEIN 41, 151 15 253 - -
Acco01g0743 257 Pfam Zinc finger, C3HC4 type (RING finger) 157 203 - -
Acco01g0743 257 ProSiteProfiles Zinc finger RING-type profile. 160 198 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0743 Acco-ChrAcco01 8549102 8553116 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0743 108 202 C3H Transcription Factor Family AT5G01960 32.000 2.07e-06 46.6