Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0727 ATGTATTTATCGGAGAAACCCCGACCCATCGATTTCTACAAAGAAGCAACCCCAGATATGATGATCGAGGTTGCGTCCAATGCCGAACTCCCTCCTCCTCCTCCGCCGCCGCCACTTCAACAACCTCCGCAACATCAAATGATCCTCGGCGACAGTAGTGGCGAGGACCACGAGGTTGAAATTAAGGCGCCAAAGAAGCGCGCTGAGACTTGGGTACAAGACGAGACCCGAAATCTTATTGCTTTTCGCCGTGAGATGGATGGGCTGTTTAATACCTCTAAATCTAATAAGCACTTGTGGGAACAGATATCATCGAAGATGAGAGATAAGGGATTTGATCGATCGCCGACTATGTGTACGGATAAGTGGAGAAATCTGTTAAAGGAGTTTAAGAAGGCGAAGCATCAAGATAGGGGAGCTGGTTCCGCTAAGATGTCCTATTACAAAGACATTGAGGAGATTTTAAAAGAGAGGAGCAAGAGTGTATGCTGCAAGAGCCCTACTCCTCCAAAGGTTGAATCCTATATGCAATTCTCTGATAAAGGTATGGAGGATACCAGCATTTCTTTTGGGCCTGTTGAAGGTCCAGCCACTGGCAGGTCAACACTCAATCTTGAGAATCGTTTGGATCATGATGAACATCCTCTTGCAATTACTGCAGCTGATACTGTTGGCACAAGTGGAGTTCCTCCTTGGAGTTGGAGAGAAACTCCTATAAGCAGTGGGGAAGGTCAATCATGTTGTGGGAGGGTCATAACAGTCAAATGGGGCGATTACACAAGAAGAATAGGCATTGATGGTACTTCAGAAGCCATCAAAGAGGCAATAAGAGCAGCTTTTAGGTTGAGAAGCAAACGTTTGTTTTGGTTGGAGGATGAATACCAGATAGTAAGGAGTCTTGACCGAGATATGCCTATAGGAAATTATACTCTTCACCTTGATGAAGGAATGGCCATTAAGCTATGCCTCTATGATGAGTCTGACCAAATTCATGTTCATACTGAAGAGAAGATCTTCTACACTGAAGAAGATCACCGTGATTTTCTGGCACGGCGAGGCTGGACGTGTCTAAGGGAACTTGATGGATTTAGAAACATTGATAACTTGGATGATCTTCAACCTGGTGCCATGTACCGGGGTGTGAGTTGA 1149 0.4526 MYLSEKPRPIDFYKEATPDMMIEVASNAELPPPPPPPPLQQPPQHQMILGDSSGEDHEVEIKAPKKRAETWVQDETRNLIAFRREMDGLFNTSKSNKHLWEQISSKMRDKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGAGSAKMSYYKDIEEILKERSKSVCCKSPTPPKVESYMQFSDKGMEDTSISFGPVEGPATGRSTLNLENRLDHDEHPLAITAADTVGTSGVPPWSWRETPISSGEGQSCCGRVITVKWGDYTRRIGIDGTSEAIKEAIRAAFRLRSKRLFWLEDEYQIVRSLDRDMPIGNYTLHLDEGMAIKLCLYDESDQIHVHTEEKIFYTEEDHRDFLARRGWTCLRELDGFRNIDNLDDLQPGAMYRGVS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0727 382 MobiDBLite consensus disorder prediction 23 54 - -
Acco01g0727 382 Pfam Myb/SANT-like DNA-binding domain 70 154 IPR044822 -
Acco01g0727 382 Gene3D - 71 133 - -
Acco01g0727 382 SMART sant 67 129 IPR001005 -
Acco01g0727 382 MobiDBLite consensus disorder prediction 28 43 - -
Acco01g0727 382 PANTHER FI21293P1 44 357 - -
Acco01g0727 382 CDD GT1 69 134 - -
Acco01g0727 382 FunFam trihelix transcription factor GT-1 71 133 - -
Acco01g0727 382 ProSiteProfiles Myb-like domain profile. 63 127 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0727 Acco-ChrAcco01 8421768 8426042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0727 19 381 Trihelix Transcription Factor Family AT3G25990 66.043 4.25e-176 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Acco01g0727 Myb_DNA-bind_4 1.4e-19 CL0123