Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0664 ATGTCTCTCTTGTACTATGGCCTTGCAGCTGTAGGAACAGCAGCCATAATATTAGCCGTATACAACCTTATCATCATCAAACGTTGCGGCCCCTGCCGCCGCCGCTCACAATCATCACCTTCATCGTCTTCATCCTCAACATCACAACCTTCAAATCGTGCAATTGAAATAGCTGTGGCAGCCACTAGAAGTTGTGATTTAAGATTGAACAGAAACTCATCACTATCAAGCTTCAAGTACAAGAAAGAATCAGAACAAGACTGTGATTGCGACTGTGAGTGCCCAGTTTGTCTTTCTGGGTTTGAAGAAGGAGAAGAGGTAAGGAAGTTACCGAGGTGTAAGCATAGATTTCATGCACTGTGCATAGACATGTGGCTTTACTCTCACTTCGATTGCCCAATTTGTCGAACACCTGTGCTGCAATTTTGCCAGCTTTTTCCGCCGCCGGCGATTCCTGGTGAAGAAGAGTTGCTCCGATCAGCCATTAATGGTGGGGTCGCGGTTTGA 507 0.4615 MSLLYYGLAAVGTAAIILAVYNLIIIKRCGPCRRRSQSSPSSSSSSTSQPSNRAIEIAVAATRSCDLRLNRNSSLSSFKYKKESEQDCDCDCECPVCLSGFEEGEEVRKLPRCKHRFHALCIDMWLYSHFDCPICRTPVLQFCQLFPPPAIPGEEELLRSAINGGVAV 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0664 168 Pfam Ring finger domain 93 136 IPR001841 -
Acco01g0664 168 MobiDBLite consensus disorder prediction 34 52 - -
Acco01g0664 168 MobiDBLite consensus disorder prediction 33 52 - -
Acco01g0664 168 ProSiteProfiles Zinc finger RING-type profile. 94 136 IPR001841 -
Acco01g0664 168 SUPERFAMILY RING/U-box 80 148 - -
Acco01g0664 168 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 9 139 IPR044675 -
Acco01g0664 168 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 142 IPR013083 -
Acco01g0664 168 SMART ring_2 94 135 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0664 Acco-ChrAcco01 7775654 7776160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0664 47 139 Rapid Response to Elicitors AT3G16720 46.237 4.87e-18 77.4