Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0657 ATGACAGGTTCATCATCAAGAAATGTTCTTAAGCCACAGCAAGAAAGAGTAAAGAAGACGAGCTTTGTGATGAGAAAAGTTCGAGTGATTTACACAGACCCAGATGCTACAGATTGTTCGAGCGAAGAAGAAGAAGAAGATGGTGGTGGATCTTTGAAGGTCATCAATGGCTGCAAGAGATTTGTGAAGGAGATTCTTGTTCCGACCAAAATGTGCGCATCAGTAGCGGGTCCCAGTTTTGTGGCCAGCACCGGCAATAAGAAGGGGACGAATCGTCGGAAATCGTCAGGCTTGCCGAGAGGAGTACGACGTCGTAAATGGGGGACCTACGTAGCGGAGATCCGAGACCCGTTTAGCAGGACCCGGATGTGGCTTGGAACTTACAACACTGTGGAAGAAGCTGCTTTGGTTTATGAGAAGAAGAAAAAAGAATTTGAAAGCTCGATGCCTGTTCCATCTCCATCATTTGTGCTTGACGTCACTCCAAATAATAACAATAATATTATTAATAATGATAGTAATTCATTGGGTAGTGGCAGTGACGATTTTTCTGTGAAAGCAGAACAGTATGAGGAAGAAGAAGGAGGGTACATTGAACAGTTACTAAAGGAGCCAATTGTGCCATCACTGGAGGATGATAGAGAAATGTTGTTTTTTGTTGGTGAGGAATTTGCTGATAATAACTTGGTCAATAATAATTGTAATAATAATAATGATGCTAATCGAGGTTTTATCTGCCTTGATGGTGAAAAGGAAGAAGGTGAGGGAAGAAGCAGTGTTCCGTTAATATCTGTTGAGAGTGATCTAGGTGATGTAGAGTTAGGCTGGATTGATGAAGCTTTCAGTGATGATGAATGGTTTGAAAGTTTTTAA 873 0.4158 MTGSSSRNVLKPQQERVKKTSFVMRKVRVIYTDPDATDCSSEEEEEDGGGSLKVINGCKRFVKEILVPTKMCASVAGPSFVASTGNKKGTNRRKSSGLPRGVRRRKWGTYVAEIRDPFSRTRMWLGTYNTVEEAALVYEKKKKEFESSMPVPSPSFVLDVTPNNNNNIINNDSNSLGSGSDDFSVKAEQYEEEEGGYIEQLLKEPIVPSLEDDREMLFFVGEEFADNNLVNNNCNNNNDANRGFICLDGEKEEGEGRSSVPLISVESDLGDVELGWIDEAFSDDEWFESF 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0657 290 Pfam AP2 domain 100 146 IPR001471 GO:0003700|GO:0006355
Acco01g0657 290 ProSiteProfiles AP2/ERF domain profile. 98 157 IPR001471 GO:0003700|GO:0006355
Acco01g0657 290 CDD AP2 100 138 IPR001471 GO:0003700|GO:0006355
Acco01g0657 290 PRINTS Ethylene responsive element binding protein signature 121 137 IPR001471 GO:0003700|GO:0006355
Acco01g0657 290 PRINTS Ethylene responsive element binding protein signature 99 110 IPR001471 GO:0003700|GO:0006355
Acco01g0657 290 MobiDBLite consensus disorder prediction 81 101 - -
Acco01g0657 290 Gene3D AP2/ERF domain 100 149 IPR036955 GO:0003700|GO:0006355
Acco01g0657 290 SUPERFAMILY DNA-binding domain 99 147 IPR016177 GO:0003677
Acco01g0657 290 SMART rav1_2 100 165 IPR001471 GO:0003700|GO:0006355
Acco01g0657 290 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 25 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0657 Acco-ChrAcco01 7700773 7701645 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0657 24 147 AP2-EREBP Transcription Factor Family AT1G68550 45.038 9.47e-23 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco01g0657 AP2 1.1e-08 CL0081