Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0652 ATGGCCGTCTTCTTCCTTCCTTCTCATACTATATTACTTGCACTCATTTTCTTTTCCCCCTCCCTTATTGTAGCTCAACCGCCAACCAACAGTGGAACAAACTTCTCATGCCCCATTGATTCACCACCTTCTTGTGAAACTTATGTATCATACCATGCGCAGTCTCCTAACTATTTGAGTCTGGTGAACATATCTGATGTATTTGGGATCAGTCCTTTATCCATTGCAAGAGCTAGTAACTTATCAGATGAAGATAGTAAGCTGATTCCAGGCCAGCTCTTACTGGTTCCTGTGACTTGTGGCTGCACCGGAAACCGCTCTTTCGCCAATATAACCTATGAGATCAAGGCAGGTGATACCTTCTACTTTGTTTCAAACACTGCATTTGAGAATCTCACGTATTGGCCTTTAGCAGAAGAGTTTAATCCCAATCAGAATCCATATCTTTTGATGCCAGACACCAAAGTAGTCTTCCCTTTGTTCTGCAGGTGCCCTTCAAGAAGCCATTTGGCCAAAGGCATAAAATTTTTTATAACTTATGTTTGGCAACCTAGCGACAATGTTTCTGTCATTAGTACCAAGTTTAATGCATCTGAAATGGACATAATGACAGAAAACAGGTACCAGAATTTCACCTTTACAGCCAACATTCCAATTATGATACCAGTGTCGCAGCTTCCAGATGTTTCTCGATTTTATTCATCACCAAAGAGAAAGGGAAACAATCATCGCCTTTTGGTTATCTTAGGTATTATATTGGGATGTACTCTTCTAACTGTTCTTATAACTATGTCACTGGTCTATGTTTATTGTCTGAGAAAGAAAAAGACTAGCTTGAAAAAGAGTGCTTCATTTTTGGAGACAGCGGATAAGCTACTTTCTGGGGTCTCGGGTTTCGTAAGCAAGCCAACCATGTATGAGTTTAGTGTAATTATGGAAGCTACCATGAATCTTAATCAACAGTGCAGGATTGGGGGATCAGTCTATAAGGCCAAAATCGATGGGCAGGTCTTGGCAGTGAAAGAAGTGAAGGAAGACGTCATGGAGGAGCTAAAGATTCTGCAGAAGGTAAATCACGCGAATCTGGTGAAATTAATGGGCTTCTCATCAGACAACAAAACTGGAAGTTGCTTCCTGGTTTATGAATATGCTGAAAATGGATCTCTTGATAATTGGCTGTACTCCATGTCTGCTTCAGACGCTTCTTCTAGTTCTGTGTCATTTCTCACATGGAGCCAAAGGATGTGCATTGCACTAGACGTGGCCTTGGGTTTGCAATACCTGCATGAACTCACTCAACCAAGAATAGTCCACAGGGACATCAGAACCAGTAACATACTTCTCGACTTGGGTTTCAAGGCGAAGATAGCGAACTTCCCAATGGCAAGAGCTTCTACAAACCCAATGATGCTAAAATCAGATGTTTTCGCTTTTGGGGTTGTTCTGCTGGATTTGCTCACAGGGAAGAAAAGCATGGCGACGAATGAAAAAGGCGAGGTAGTGATGGTGTGGAAGGATATCAGAGGAATCTTTGATGGAGAGGATGAGAAGAAGAAAAAGGAGAGACTGAGAAAATGGATAGATCCTAGGCTGGGAAACTTTTATGCCATTGATGATGCTCTAAGCTTGGCCTTCTTGGCAGTGACTTGCACTGCAGATAGGCCTTTGTCCAGACCAACTATGGCACAAGTTGTTCTTAGCCTCTCGTTTCTGAGTCAATCATGTCCTGGCATGATGGTAGAACGATGGACTTTTCCGGGTGGGTTAGATGTTGAAGTTCCTCAAATGATAAGTCCTATCACAGCTCGTTGA 1812 0.4233 MAVFFLPSHTILLALIFFSPSLIVAQPPTNSGTNFSCPIDSPPSCETYVSYHAQSPNYLSLVNISDVFGISPLSIARASNLSDEDSKLIPGQLLLVPVTCGCTGNRSFANITYEIKAGDTFYFVSNTAFENLTYWPLAEEFNPNQNPYLLMPDTKVVFPLFCRCPSRSHLAKGIKFFITYVWQPSDNVSVISTKFNASEMDIMTENRYQNFTFTANIPIMIPVSQLPDVSRFYSSPKRKGNNHRLLVILGIILGCTLLTVLITMSLVYVYCLRKKKTSLKKSASFLETADKLLSGVSGFVSKPTMYEFSVIMEATMNLNQQCRIGGSVYKAKIDGQVLAVKEVKEDVMEELKILQKVNHANLVKLMGFSSDNKTGSCFLVYEYAENGSLDNWLYSMSASDASSSSVSFLTWSQRMCIALDVALGLQYLHELTQPRIVHRDIRTSNILLDLGFKAKIANFPMARASTNPMMLKSDVFAFGVVLLDLLTGKKSMATNEKGEVVMVWKDIRGIFDGEDEKKKKERLRKWIDPRLGNFYAIDDALSLAFLAVTCTADRPLSRPTMAQVVLSLSFLSQSCPGMMVERWTFPGGLDVEVPQMISPITAR 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0652 603 Gene3D Phosphorylase Kinase; domain 1 295 383 - -
Acco01g0652 603 ProSiteProfiles Protein kinase domain profile. 286 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0652 603 ProSiteProfiles LysM domain profile. 49 96 IPR018392 -
Acco01g0652 603 SMART tyrkin_6 318 568 IPR020635 GO:0004713|GO:0006468
Acco01g0652 603 Pfam LysM domain 60 97 IPR018392 -
Acco01g0652 603 Gene3D Transferase(Phosphotransferase) domain 1 384 466 - -
Acco01g0652 603 Gene3D Transferase(Phosphotransferase) domain 1 467 578 - -
Acco01g0652 603 Pfam Protein tyrosine and serine/threonine kinase 341 465 IPR001245 GO:0004672|GO:0006468
Acco01g0652 603 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 14 575 - -
Acco01g0652 603 ProSitePatterns Tyrosine protein kinases specific active-site signature. 436 448 IPR008266 GO:0004672|GO:0006468
Acco01g0652 603 SUPERFAMILY Protein kinase-like (PK-like) 323 571 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0652 Acco-ChrAcco01 7654752 7656563 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0652 12 574 Receptor kinase-like Gene Family AT2G33580 28.939 8.19e-70 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Acco01g0652 PK_Tyr_Ser-Thr 3.2e-22 CL0016