Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0629 ATGTTGAACGTTAGTTTTACTTTGGAGACTTGCATATTTCTGTTAAAGAACTTTATCATGATTTCAGGTCGTTGTGCAGCTTGTAAGAGTCAAAGAAGAAAGTGCCCTTCAGATTGTATTTTCTCTCCCTATTTTCCTCCCAACGATCCTCAAAGATTTGCTTGTGTTCATAGAATATATGGTTGCAGCAATGTTGGGAAAATGCTTCAGCGAATGCCAGTGCAGATGAGAGCACAGGCAGTGGATACATTATATATGGAAGCAAGATGGAGGATAGAAGATCCAGTGTATGGCTGTGTTAAGCTTATTTCTCAGTTGCATCAGAACCTATATGATACAGAAAGTGAATTAGCCAAAGTTAAAGCTTTTATTGCCTTCCACAAGCTCCAAATCTCACAAGTGAATGAACTTCATCAACCCAACTTGGATGCATCACAAAGCAATGTTGGGCACTTTCAATTCAATTATTATACTCAGAATCAATATCCTTGGTTTATTAATTAG 504 0.375 MLNVSFTLETCIFLLKNFIMISGRCAACKSQRRKCPSDCIFSPYFPPNDPQRFACVHRIYGCSNVGKMLQRMPVQMRAQAVDTLYMEARWRIEDPVYGCVKLISQLHQNLYDTESELAKVKAFIAFHKLQISQVNELHQPNLDASQSNVGHFQFNYYTQNQYPWFIN 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0629 167 Pfam Lateral organ boundaries (LOB) domain 24 121 IPR004883 -
Acco01g0629 167 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 24 142 - -
Acco01g0629 167 ProSiteProfiles LOB domain profile. 23 124 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0629 Acco-ChrAcco01 7432013 7434942 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0629 20 134 AS2 family AT3G26660 59.130 4.48e-48 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Acco01g0629 LOB 9.8e-36 No_clan