Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0628 ATGATTTCAGGTCGTTGTGCAGCTTGTAAGAGTCAAAGAAGAAAGTGCCCTTCAGATTGTATTTTCTCTCCATATTTTCCTCCCAACGATCCTCAAAGATTTGCTTGTGTTCTTAGAATATATGGGTGCAGCAATGTCGGGAAAATGCTTCAGCAAATGCCAGTGCAAATGAGAGGACAAGCAGTGGATACGTTATATATGGAAGCAAGATGGAGGATAGAAGATCCAGTGTATGGTTGTGTTAAGTTTATATCTCAGTTGCATCAGAACCTAGATGATACAGAAAGTGAATTAGCCAAAGTTAAAGCTCTTATTGCCTTCCACAAGCTCCAAATCTCACAAGTGAATGAACTTAATCAACCCAACTTGGATGCATTACAAAGCAATGTTGAGCAATTTCAATTCAATTACTATACTCAGAATCATTACCCTTGGTTTATTAATTAG 447 0.3781 MISGRCAACKSQRRKCPSDCIFSPYFPPNDPQRFACVLRIYGCSNVGKMLQQMPVQMRGQAVDTLYMEARWRIEDPVYGCVKFISQLHQNLDDTESELAKVKALIAFHKLQISQVNELNQPNLDALQSNVEQFQFNYYTQNHYPWFIN 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0628 148 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 118 - -
Acco01g0628 148 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
Acco01g0628 148 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Acco01g0628 148 Coils Coil 84 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0628 Acco-ChrAcco01 7428713 7429427 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0628 1 116 AS2 family AT3G26620 57.759 1.23e-46 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Acco01g0628 LOB 5.8e-35 No_clan