Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0627 ATGATGGCAACTAACTTAACGGGGCAGCTTTTGGGCTCAGAGATACATGGATTCCATACGATGCAGGAGTTGGATGTTGAAATTATTATGGAGGAAGCAAGACGCAGATGGCTTCGTCCCAATGAGATTCATGCCATACTCTGCAATTACAAACATTTTACCATCCATGTCAAGCCAGTGACTTTGCCCAAAAGTGGTACTATTGTATTATTTGATAGGAAGAAGCTAAGGAACTTTCGTAAAGATGGACACAATTGGAAAAAGAAAAAGGATGGGAAAACTGTTAAAGAAGCTCATGAGCACTTAAAAGTTGGTAATGACGAAAGGATCCATGTATACTATGCTCATGGTGAAGAAAACTCAAACTTTGTTCGCAGATGTTATTGGTTGCTTGATAAGAGTCTGGAGCATATTGTCCTTGTTCATTACCGTGAAACACAGGAGCCACAAGGTTCTCCACTCACACCTGTATATTCAAATGCTAGTTCTCCCTCTGATCCAACAACACCATGGGTATTATCAGAAGAATTAGATTCTGGGATCAACAAGGCATGCGGTGGTGAGCTGAATGACAATTTAACAGTCAAAAATCATGAAATGAGGCTTCATGAGATTAATACACTTGAATGGGATGACCTAGTGGCTACAAATGATCTTGCCACCACCACTACCTCCACCCCTACTGGAGGAAAGGTTCCTTGTTTTCATCAAGAAAAACAAATTTTACTGAATGGAAATTCGAGCAGGGTAGTCAACAATCAATCTGCAGAAATTCATTCTTTTGATATTCTGAACAATTCAATTGATGGGATCAATAGTGCTCTATACAATTTTCCTGAAAGTTCGAATCTTCAGACTGCCAACTGTCAAGTAAATTCAAATGAACAGAGTGAGCATTCTATCACCATGGATGGTGGTGATTTTGTAAACAGTATCATCAATGACACTCTGCAAAGCCAGGACAGCTTTAGAAATTGGATAAGCAATATGATGTCTGATTCATCATGTTCTATTGATGACTCAGGTCTTGAGTCCCCAGTTTCATCTGTTCATGATTCATACTCTTCAGGATTGGATAATCATCAATCTTCTCTGCCAGAACAATTATTTAATATCACTGACGTGTCTCCTGTCTGGGCATGCTCCACTGAGAAAACAAAGGTCCTAATAACTGGATTTTTTCGTGATGACTATGTGCACCTCGCGAAGTCCAATCTGTTTTGTATCTGTGGGGATGTATCTGTTCCTGCAGAAATTGTTCAAGTTGGTGTCTACCGATGCTGGGTACCACCACATTCCCCTGGTTTTGAGAATCTCTGTATGAGTTTTGATGGCCATAAGCCCATAAGTCAAGTTTTCAATTTTCAGTATCGTGCTACTGTTTTGCAAGACCCTGCAGCTTCCGTTGAAGAGAGTTACAACTGGGAGGAGTTCCAACTTCAAATGAGGCTTGCATATTTGATCTTCTCTACACAAAAGAGTCTTGACATTACCTCTAGCAAAGTATCACCTGATGCACTGAAGGAGGCTAAAAAATTTGTCTTCAAGACATCATATCTTTCTAAAAGTTGGCAATACTTGATTAAGTCTACTGAAGACCGCAAAACTCCATTTCTACAAACAAAAGATGCCTTGATTGAAATTGCATTGAAGACTAAACTAAAGGAATGGCTGTTGGAGAGAATTCTTTTAGGCAGTCAGACTACTGAATTTGATGCCCAAGGTCAAGGTGTAATCCACTTATGCTCGATTTTAGGATATATATGGGCTGTTTCATTATTTTCATGGTCTGGTTTTTCATTGAATTTCCGTGATAAATTTGGATGGACAGCCCTGCACTGGGCGGCTTATTATGGAAGGGAGAAAATGGTTGCTGCTCTATTGTCTGCAGGGGCAAGGCCGAATTTGGTCACGGATCCTACTCCTCAACATCCTGGTGGTTTTACTGCTGCTGATCTGGCTCAGATGAAAGGTTATAATGGCTTAGCAGCTTACCTTTCGGAAAAGTCTCTGGTTGGGCAGTTCAATGACATGAGCATCGCAGGAAATATCAGTGGCTCGCTGGAAACTGTTAGCACAAGTGATCCAGTAAATTCTGGGAAGCTCAATGAGGATCAACTGTATATGAAGGATACATTAGCTGCTTACCGGACCGCTGCTGAGGCTGCAGCGCGCATACAGGCTGCATTTAGGGAGCATTCACTAAAATTACGATCTCATGCAGTTCAACTTTTCTGTCCAGAGGCTGAAGCACGCCAAATAGTTGCAGCAATGAGAATCCAGCATGCTTTTAGAAACTTTGAGTCGAGGAAGTCTTTGGCAGCAGCTGCTCGCATCCAGCATACTTTCCGTACGTGGAAGATGCGTAGAGAATTTCTCAATATGCGTCGCCAGGCAATCAAGATTCAGGCTGCTTTCCGGGCCTTTAAGGAGCGGAAGAACTACCACAAAATCATCTGGTCTGTTGGAGTGGTTGAGAAAGCAATCCTGCGGTGGCGTTTAAAGAGAAAGGGCTTCCGTGGCCTACATGTAAATCCTGCTCAAGTTGTAGGTCAGAAGGAAGAAGCAGAGTTTGTTACAGAGGAGGACTTCTTCCGGATTGGCAGGAAACAAGTCGTAGAACGTGTTGAGAGAGCTGTAGTACGTGTTCAAGCTATGTTTCGCTCAAAGAAAGCACAAGTAGATTACAGGAGGATGAAACTAGCCCATAATCAAGCAAAGCTGGAACTTGAATATGAAGAACTCCTCAATTCTGAGTTTGATATGGGAGTGAAGACATAG 2781 0.4193 MMATNLTGQLLGSEIHGFHTMQELDVEIIMEEARRRWLRPNEIHAILCNYKHFTIHVKPVTLPKSGTIVLFDRKKLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNDERIHVYYAHGEENSNFVRRCYWLLDKSLEHIVLVHYRETQEPQGSPLTPVYSNASSPSDPTTPWVLSEELDSGINKACGGELNDNLTVKNHEMRLHEINTLEWDDLVATNDLATTTTSTPTGGKVPCFHQEKQILLNGNSSRVVNNQSAEIHSFDILNNSIDGINSALYNFPESSNLQTANCQVNSNEQSEHSITMDGGDFVNSIINDTLQSQDSFRNWISNMMSDSSCSIDDSGLESPVSSVHDSYSSGLDNHQSSLPEQLFNITDVSPVWACSTEKTKVLITGFFRDDYVHLAKSNLFCICGDVSVPAEIVQVGVYRCWVPPHSPGFENLCMSFDGHKPISQVFNFQYRATVLQDPAASVEESYNWEEFQLQMRLAYLIFSTQKSLDITSSKVSPDALKEAKKFVFKTSYLSKSWQYLIKSTEDRKTPFLQTKDALIEIALKTKLKEWLLERILLGSQTTEFDAQGQGVIHLCSILGYIWAVSLFSWSGFSLNFRDKFGWTALHWAAYYGREKMVAALLSAGARPNLVTDPTPQHPGGFTAADLAQMKGYNGLAAYLSEKSLVGQFNDMSIAGNISGSLETVSTSDPVNSGKLNEDQLYMKDTLAAYRTAAEAAARIQAAFREHSLKLRSHAVQLFCPEAEARQIVAAMRIQHAFRNFESRKSLAAAARIQHTFRTWKMRREFLNMRRQAIKIQAAFRAFKERKNYHKIIWSVGVVEKAILRWRLKRKGFRGLHVNPAQVVGQKEEAEFVTEEDFFRIGRKQVVERVERAVVRVQAMFRSKKAQVDYRRMKLAHNQAKLELEYEELLNSEFDMGVKT 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0627 926 Pfam CG-1 domain 32 145 IPR005559 GO:0003677
Acco01g0627 926 ProSiteProfiles IQ motif profile. 774 801 IPR000048 GO:0005515
Acco01g0627 926 ProSiteProfiles IQ motif profile. 753 782 IPR000048 GO:0005515
Acco01g0627 926 Pfam Ankyrin repeats (3 copies) 563 636 IPR002110 GO:0005515
Acco01g0627 926 ProSiteProfiles IQ motif profile. 795 819 IPR000048 GO:0005515
Acco01g0627 926 SMART iq_5 875 897 IPR000048 GO:0005515
Acco01g0627 926 SMART iq_5 794 816 IPR000048 GO:0005515
Acco01g0627 926 SMART iq_5 771 793 IPR000048 GO:0005515
Acco01g0627 926 Pfam IQ calmodulin-binding motif 797 816 IPR000048 GO:0005515
Acco01g0627 926 Gene3D - 773 819 - -
Acco01g0627 926 MobiDBLite consensus disorder prediction 149 170 - -
Acco01g0627 926 ProSiteProfiles Ankyrin repeat region circular profile. 607 635 - -
Acco01g0627 926 SUPERFAMILY Ankyrin repeat 556 669 IPR036770 -
Acco01g0627 926 Gene3D - 527 670 IPR036770 -
Acco01g0627 926 ProSiteProfiles Ankyrin repeat profile. 607 639 IPR002110 GO:0005515
Acco01g0627 926 SMART ANK_2a 607 636 IPR002110 GO:0005515
Acco01g0627 926 SMART CG_1_2 29 147 IPR005559 GO:0003677
Acco01g0627 926 ProSiteProfiles CG-1 DNA-binding domain profile. 26 152 IPR005559 GO:0003677
Acco01g0627 926 ProSiteProfiles IQ motif profile. 877 905 IPR000048 GO:0005515
Acco01g0627 926 SUPERFAMILY E set domains 371 458 IPR014756 -
Acco01g0627 926 Gene3D Immunoglobulins 366 461 IPR013783 -
Acco01g0627 926 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 25 905 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0627 Acco-ChrAcco01 7417867 7427443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0627 29 909 CAMTA Transcription Factor Family AT3G16940 54.350 0.0 919
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Acco01g0627 Ank_2 2.4e-06 CL0465