Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0622 ATGGTAAGAGCACCGTGTTGCGAGAAAGTGGGATTGAAGAAAGGAAGATGGACGGCTGAAGAAGATCAGATATTGACACAGTACATCCAACAACATGGTGAAGGATCCTGGAGAAACTTGCCCAAGAATGCTGGATTGTTGAGGTGTGGGAAGAGTTGCAGACTGAGATGGATAAACTACTTGAGGGCAGATGTGAAGAGAGGAAACATAACTCCTGAGGAAGAAGAAATTATCGTCAAGTTGCATGCCGCTCTCGGCAACAGGTGGTCCGTGATAGCAGGGCATTTACCAGGACGGACAGATAATGAGATAAAGAATTATTGGAACTCTCATTTAAGGAGAAAAATCTACTGCTTCATCAAAACCCTAAACGAATCCCTTCCTTTTGTAAACGACATTGCTACTTCCTCCAAACGACGAGGTGGTCGGATCGGGCCCACTCAACACACCACCAAGCCCAACAGCCCGACTACTCCAGCCCAAAATTTCCACTCACACAATAACTTAGGCAAGGTGTTTGAGAAAATGTCCACACCAATCCCAAACCGACAAACTTGTGCTATTAATGCAGGACCTAATCAAGATGTTGCCATAACGGCTTCTTTATGTTCAAGTGATGATAATCTTGATGAGACCATGGGACCATATCAGTGGCTAGACGATGAGATAAAGAAACTTAGTTACATGTTCGAAAATGGTGTGTTTATGAACGCAAGTGAGAATTATGTGGAACCAGAAAATGAGTTAGTGATGGGCAGAAATATTGACATGGTTGGGGGAGATTTGTATGAACTTGTGGGAAAGCAAATCATGGGAGCAAGTGATGAGAATGTTATGAGCAGAAATAGCAACGTTAATTCGTCGGAGATTTCAGTCTATGATTATCAGTGGCTTGATTGGGATTACCATCAACAACATCTTTGTGAAGAAGAGAACCTAAATGTGAACTCTTTGTGGGGTGATGGAAATGGTGAAGAATTTGGGGGAAGTTTGTGTTCATATTAA 1005 0.4259 MVRAPCCEKVGLKKGRWTAEEDQILTQYIQQHGEGSWRNLPKNAGLLRCGKSCRLRWINYLRADVKRGNITPEEEEIIVKLHAALGNRWSVIAGHLPGRTDNEIKNYWNSHLRRKIYCFIKTLNESLPFVNDIATSSKRRGGRIGPTQHTTKPNSPTTPAQNFHSHNNLGKVFEKMSTPIPNRQTCAINAGPNQDVAITASLCSSDDNLDETMGPYQWLDDEIKKLSYMFENGVFMNASENYVEPENELVMGRNIDMVGGDLYELVGKQIMGASDENVMSRNSNVNSSEISVYDYQWLDWDYHQQHLCEEENLNVNSLWGDGNGEEFGGSLCSY 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0622 334 Gene3D - 13 66 - -
Acco01g0622 334 MobiDBLite consensus disorder prediction 137 165 - -
Acco01g0622 334 CDD SANT 16 61 IPR001005 -
Acco01g0622 334 Gene3D - 71 116 - -
Acco01g0622 334 SMART sant 66 114 IPR001005 -
Acco01g0622 334 SMART sant 13 63 IPR001005 -
Acco01g0622 334 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 174 - -
Acco01g0622 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Acco01g0622 334 FunFam Myb transcription factor 11 67 - -
Acco01g0622 334 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Acco01g0622 334 FunFam Myb transcription factor 71 116 - -
Acco01g0622 334 MobiDBLite consensus disorder prediction 141 165 - -
Acco01g0622 334 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Acco01g0622 334 CDD SANT 71 112 IPR001005 -
Acco01g0622 334 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Acco01g0622 334 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Acco01g0622 334 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Acco01g0622 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0622 Acco-ChrAcco01 7334578 7338483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0622 1 226 MYB Transcription Factor Family AT5G49330 52.609 1.33e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco01g0622 Myb_DNA-binding 7.7e-14 CL0123