Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0621 ATGAGTGCCTCTGAAAACCCTAACTGTAATAAGTGCGAGACGAGAAAATCTTCATCATCATCTTCTTCTTCAGCTAATCTGAAGCTATTTGGTTTCCCATTAAGGGAAAGTGCTCGTGATGCTTTCATTTCCTCATCAAACTACAAGAGATCATTCAAATGCCATTTCTGTCGGAAAGAATTCTCTAATTCTCAAGCTCTTGGAGGCCACCAAAATGCTCATAAAAGAGAACGTCGTCAAGCTACCTTTGCTCATTTCGACAACCTTAGCGTTCATCTCCTTCGTCACCGTCAACGCCTCGAGATCATTTCATCATCTTCAGCACCATCAGGACCGTCCACGACGACCAAGCTTGTTTATCATCATCATCAACCTTTTTGGTCCGAGCCGGAGCTTTGGAATGCAGTTCGATCCGACGACAGAGAGGCCCGTGATGATGCTGAGAAAGAGCTCTCGAGTGATGAAGGATCAGTACGGAATGGTGATGATGGTGTTGATCTTAACTTGAGTTTATAG 516 0.4419 MSASENPNCNKCETRKSSSSSSSSANLKLFGFPLRESARDAFISSSNYKRSFKCHFCRKEFSNSQALGGHQNAHKRERRQATFAHFDNLSVHLLRHRQRLEIISSSSAPSGPSTTTKLVYHHHQPFWSEPELWNAVRSDDREARDDAEKELSSDEGSVRNGDDGVDLNLSL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0621 171 ProSitePatterns Zinc finger C2H2 type domain signature. 54 74 IPR013087 -
Acco01g0621 171 Gene3D Classic Zinc Finger 36 85 - -
Acco01g0621 171 ProSiteProfiles Zinc finger C2H2 type domain profile. 52 79 IPR013087 -
Acco01g0621 171 PANTHER ZINC FINGER PROTEIN 5 15 171 IPR044299 GO:0010090
Acco01g0621 171 SUPERFAMILY beta-beta-alpha zinc fingers 49 79 IPR036236 -
Acco01g0621 171 MobiDBLite consensus disorder prediction 138 171 - -
Acco01g0621 171 MobiDBLite consensus disorder prediction 1 25 - -
Acco01g0621 171 MobiDBLite consensus disorder prediction 138 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0621 Acco-ChrAcco01 7315924 7316439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0621 27 81 C2H2 Transcription Factor Family AT5G06650 45.455 1.36e-11 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco01g0621 None None None