Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0612 ATGGTCCGACTTCTGACCATCTTGTTCGATCGGCTTGGGGCCCAGTTAAGTCCAACAGAACAATTTTTGTATTGGGACCGCGGCAAATCCAACTGCTTGGGCGGCAAGACAATGGGAGTGAAGGGTCTCTGGGAACTTCTTGCCCCCGTTGGTCGTCGGGTCTCCGTCGAGACCCTTGCCGGGAAGAAGCTCGCCATTGATGCGAGCATATGGATGGTTCAGTTTATGAAGGCCATGCGGGATGAGAAGGGAGAAATGGTTCGCAATGCTCATTTGCTCGGCTTCTTTCGCCGAATTTGCAAGCTTTTGTTCCTCCGGACTAAGCCTGTTTTTGTCTTTGATGGCGGCACGCCTGTTCTTAAGCGACGGACTGTGATTGCGCGTCGGAGGCAGCGCGAAAATGCTCAGGCCAAAGTTCGAAAGACTGCCGAGAAATTGCTTCTCAATCATTTGAAGGCATTGAAGTTGAAAAAACTTTCAGATGACGTCAAAAACCAGAGGGTGAAGCAGAATGGTGAAGCTAAGGGTCAGAAAAAATCAGATCAGGTGGACTTAATTGGCTGTGATTTAGGAAGAAACAATGAAAAAGAGCAAGATAAAGCATGTGGAGCTGAAGTGGACAAGAATATATCCAAGGCTACTGTATCAACAAGTTGCAATCAGGAGGATCTTGATGCAATGTTGGCAGCGTCTATTGTTGCAGAGGAAGATGAATTATTAGCTGGTAAAGCACCATGTGGTGTAGTCAGCCTCTCTGAGGAGGAAGATGATACAGATCCAGAAATAATTTTGCCAGCGTTAGGTGCTGAAGTTGATCTATCTGTGTTAGCTGCTTTACCGCAGTCAATGCAATTTGATATTCTCTCTCAGCTTAAAGGGAAAAAAGAAGGACCACTGAAGGATTCTAACAACCAGAAACAATTTGAGGTCAGTGAAAAGGACAGGGGCAAGGGTAAGGGAATTCTGTTGCATGAAGTCAACACAGTAGGATGCAGGTCAAGCAGTGATGATACGGTGCCAAAGCAATACAATCAGGAAAAAGTGGATGAAATGTTGGCTGCATCTATTTTGGCTGAGGAAAATGAAAAGTTAGTAAACAGTGCATCAACATCTGGTGGGCCTTTCATCTCTGAGGAAGAGAATTTCATTAATGATGAAGACGAAGAAATGATCTTGCCAGCAATGCACGGTAAGATTGACCCAGCTGTTCTAGCCTCTTTGCCTCCATCAATGCAACTTGACCTTCTTGGTCAGATGAGAGAGCGACTGATTGCAGAGAACAGACAGAAGTATCAGAAAATCAAGAAGGATCCTGCAAAATTCTCTGAATTACAAATACAGGCTTACCTTAAAACTGTTGCTTTTCGTCGGGAGATAAATGAAGTGCAGAAAGTTGCTGCAGGGGGAGTGGTAGGTGGTGTGCAGACTTCTCGTATTGCATCTGAAGCCAACAGAGAGTATATATTTTCAAGATCTTTTACTGGTGATAAACAAGAACTTACTTCTACCAGCTTACATAAAAATAAAAACACACATCAGAAGACTCTAGGAAACCAATTTTCTCAGGGTTCTGTGAATAACAGTGATCCTGCCAATGATTCTAGTACCTCAAGTAGGTTGGCTTCCAATGAAGCTGGAAGTCCATCTGATGAGAATATCCAAACTTATCTGGATGAGAGGGGCCAATTTCGTGTTAGTAGACTTAGAGCTATGGGGATGCGTATGACCCGTGACATACAACGAAATTTGGATCTGATGAAGGAGATTGAGCAGGAAAGAACAGTTGTAAATAAGGCAGCAAATAATAATGCAATTCTTAGTGGGGAGGAAAATGTTGCATCGAAAGCTTCTAGCAACCTGCTTGTTGATACATCCAACGGATCAAATGTTGACTTAGTTGGAGATAATTCTAGAAATAAACACCCTGCATTAGTAGGGGATGCTTCTTTAGAGATATCCTTCATGGATGATGGTGATAACAAGTGCCTTAATGATGATGATAATGATGATGATTTATTTGCTAGTTTAGTAGCAGGTAATTCTGTAGCATTTTCTAGTGCTGACAAGAACTCATTGAAAGAACAAGTTTCTGATTCTACTTCTGATTGTGACTGGGAAGAAGGAATTGTTGAAGGTAAAAGTGGTGTTCATGTGGAAATAAAATCACCTGTTTCAAAAGATAATTATAATGATGTGTCTGATGTAGAATGGGAGGATGGAGTTTGTGATGATGCTGACACAACAGTGTGTGCAGCTGAGGTACAGAAAAAAACATCTCGAGGTTGCTTGGAGGAGGAGGCTGACTTACAGGAGGCAATACGGAGAAGCCTGGAGGTCATGGGGGACTGCAAACTTAATGGCGCATCATCCAGGCATGAGTACTCAAATGCTGATGGGGACAGATCAGATTATGCATTAAACCAAGAAGATAATTTGGTTGATTCTGGAGTGAAGAGTATTTGTGGCAATTTTGGAGCACCGAAGAGAGATGCTGGAATGGGTGAGTCTACTTTGCATAGGGAAGGTAACACTGAACACAGAGAATCAAATTATAAAGTTATAGATGATAGGATGGATGGCACAGTGAGTAGTAATAAACAAGATTCCCATTCTCCTGAGAGACAGTCAGAGTCATCTGTGGTGTTTGATTCTGAGCAGACAGCGTCATTTATTAAGAAGCCTCATTCAATAGAGATAGGATCACATTCTGAAGATTTGTTGCCCGCTGCAGATGGAAGTACGAGGAATAAGATTCACATGGCTGCAGAGCAACTCTTGGGTACCTTAAATGAGGATGGAAAGGTGTTTGCCAATGGTAACCAATCTCCTGTAGCTGACTCCCTTGGTGCTTCAAAAGAGGAGAAAAAGAACTGCAGTTATGAAGCTGAACCTTTTGGTAATTATTCTGAGAAGCCTGAGCCTGTTGCTCCTTTTGTGGATTCCTCATCAGAAGGATTAACAGAAGACCTGGACACTCAGCTAGAGTTGCCTAGAGAGAACTGTGGAAGCTTTGAGAAAAGGAAGAGTGACCTTGGTAAAGATGCAATGGAGCCCCCAGGGCTTTTGTCTGCCAAAGACCTTGAAACCCAGTCAGAGTTTCCTGGAGAGGATAACCATGGAGGCTTTGAGGAAAGCAAAAATAACCTTGTTGAAAATGCAAATGACGCCCCAGGTCACTTGTTTGCAGACGCAACCGAGCATGGTTTGGAGGAAGAAATCCGAATTCTTGGTCAAGAATATACCAACCTGGCATATGAGCAGAGGAAGCTTGAACGCAACGCCGAATCCGTCAACAGTGAATTATTTACTGAATGTCAGGAACTATTGCAAATGTTTGGCTTGCCATATATTATCGCTCCAATGGAAGCAGAAGCACAATGTGCTTATTTGGAACTTGCAAAACTGGTGGATGGCGTTGTGACTGATGACTCTGATGTCTTTTTATTTGGGTCACGTAGTGTCTACAAGAATATATTTGATGATCGCAAATATGTAGAGACATACTTCATGGAGGACATCGAGAAGGAGCTTGGATTGACCAGAGAAAAATTAATCCACATGGCTTTGCTTCTGGGGAGTGATTATACTGAAGGTGTAAGTGGGATTGGAATTGTAAATGCTATTGAGGTTGTAAATGCATTCCCTGAGGAAGATGGCCTTCTGAAATTCCGGCAGTGGGTTGAGTCACCTGATCCTACCATCTTTGGAAGGCTTGAGACAAAAAGTGGAACAAGCACCCGAAAGAAAGGTTCAAAAGTTGAAGAAAATCTTCCTGGCAGAAGTTGCAATATAGAAGAGACTATGACAGATCAAAACATTTCCCATGCTCAGGAACATGACTCATCAGATGACATCCAAGAAACTAAGCAGATTTTTATGAATAAACATAGAAATGTAAGCAAGAATTGGCACATTCCTTCTTCTTTTCCAAGTGAAACAGTTATATCTGCCTACTCTTCTCCACGAGTGGACAAGTCAACTGATCCATTTGCCTGGGGAAAGCCAGATCATCTTGTCCTTCGCAAGTTGTGCTGGGAGAAGTTTGGCTGGACTAGTCAGAAAGCAGATGAGTTGCTTTTACCTGTTTTAAAGGAATACAACAAAAATGAGACTCAATTGCGGTTAGAAGCATTTTATACTTTTAATGAAAGATTTGCAAAAATTCGCAGCAAGAGAATTAAGAAAGCAGTGAAAGGAATCACTGGTGATCACCCTTCAGAGTTTACAGATGAGCCTGCAGAGGACTTGTCTAAGAGTAGGAAGAATGAGACAGGAATTCCTGCTGAACTTGGGATTAGCAAATCAGACACTTTTAAGGGAACAGGAGAAAGCCCGGATGACATGAAGCCATTAAATTTAAAACAGTCAAGGAAAAGGAAGAATTCTGGAGATACTGTTGCTAAGACAGAGTCAAGGAAAAAGGGTAAATTGAATGCTCCTGTGTCGGCTTCTGGTCTGCCCAAGGTAGATGTGCAGACAGGAGCAGAGCAAGCTCAGCCAAGTGATGATAATGGTTTGAGTCAGAATAGAAGTAATAAAGGCAGGGGAAAAGGTGTAAGAGTTCCAAGAGGAAGGAGGAAGAGAAGTCTTGGTACTGATTCACGTAAAACTACATCTAGTGATAGTGAAAGTGATGACCATGAGCCTGAACTACATGGTATAAACTCAAGAGGCACTGTAGGGGTCCGACGGTCTCTGCGATCACGGAAGAGTGTCAACTATGCCATGGACAACATTGAAACTGAAGATACTGTTGCCTCACCTGATCAGAGCAATAAGGAAGACTTGAATAGAGAGCAGACAGATGAAATATTTTCTGGGCTGCATGGTGTTTGCGGCAATGATGACTCTGGTTTCAGCAGACACAAGGAAAGCACAAAAAATCTTTCTCCTAAGAAAGATTTGCCTAGAAGCTATCTTGAATCTGGAGGGGGTTTCTGTAATGAAGAAAAAACTAGTCATGCAGGAGCGAGCAATTGTGATAGCTCCCATGATGGCGACTACCGTAAAGTGGGAGGTGGATTTTGCCTAGATGACAATGAGACTGGTAGCAAACATAATGAAATTCATGACGATGACGACGACTACCTTAGAGTGGGAGGTGGGTTTTTCCTAGACGAGGATGAGACTGGTAGCAAACATAATGAAATTCATGATGATTTGGCAACTATGGTGGATGATAGTGCAGAGCTCACTCGTGGTTGTTCTGGTTTTGTGGAAGAGGCTGAATGTGCTAAAAATATAACTTATAAATCAAGTTCAGTCAATGAAACATCTGGAATTGAACTGCAAGACAGAGGGAACTCTAAACTAAAGAGTGTGATGAATCATGACTCTGTGAATGCTAGAAGTAATTATGATCAGCTTGAGTCTGACACGGGGGTTTGGATATCAGAGAATGCCCAAGGTGATACTGAGAACGCCGCAGTAGCATTTAGTGCTATGCCTTTTCTTAGGAAGAAAAGAAGGAAGAGCTGA 5478 0.4257 MVRLLTILFDRLGAQLSPTEQFLYWDRGKSNCLGGKTMGVKGLWELLAPVGRRVSVETLAGKKLAIDASIWMVQFMKAMRDEKGEMVRNAHLLGFFRRICKLLFLRTKPVFVFDGGTPVLKRRTVIARRRQRENAQAKVRKTAEKLLLNHLKALKLKKLSDDVKNQRVKQNGEAKGQKKSDQVDLIGCDLGRNNEKEQDKACGAEVDKNISKATVSTSCNQEDLDAMLAASIVAEEDELLAGKAPCGVVSLSEEEDDTDPEIILPALGAEVDLSVLAALPQSMQFDILSQLKGKKEGPLKDSNNQKQFEVSEKDRGKGKGILLHEVNTVGCRSSSDDTVPKQYNQEKVDEMLAASILAEENEKLVNSASTSGGPFISEEENFINDEDEEMILPAMHGKIDPAVLASLPPSMQLDLLGQMRERLIAENRQKYQKIKKDPAKFSELQIQAYLKTVAFRREINEVQKVAAGGVVGGVQTSRIASEANREYIFSRSFTGDKQELTSTSLHKNKNTHQKTLGNQFSQGSVNNSDPANDSSTSSRLASNEAGSPSDENIQTYLDERGQFRVSRLRAMGMRMTRDIQRNLDLMKEIEQERTVVNKAANNNAILSGEENVASKASSNLLVDTSNGSNVDLVGDNSRNKHPALVGDASLEISFMDDGDNKCLNDDDNDDDLFASLVAGNSVAFSSADKNSLKEQVSDSTSDCDWEEGIVEGKSGVHVEIKSPVSKDNYNDVSDVEWEDGVCDDADTTVCAAEVQKKTSRGCLEEEADLQEAIRRSLEVMGDCKLNGASSRHEYSNADGDRSDYALNQEDNLVDSGVKSICGNFGAPKRDAGMGESTLHREGNTEHRESNYKVIDDRMDGTVSSNKQDSHSPERQSESSVVFDSEQTASFIKKPHSIEIGSHSEDLLPAADGSTRNKIHMAAEQLLGTLNEDGKVFANGNQSPVADSLGASKEEKKNCSYEAEPFGNYSEKPEPVAPFVDSSSEGLTEDLDTQLELPRENCGSFEKRKSDLGKDAMEPPGLLSAKDLETQSEFPGEDNHGGFEESKNNLVENANDAPGHLFADATEHGLEEEIRILGQEYTNLAYEQRKLERNAESVNSELFTECQELLQMFGLPYIIAPMEAEAQCAYLELAKLVDGVVTDDSDVFLFGSRSVYKNIFDDRKYVETYFMEDIEKELGLTREKLIHMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLLKFRQWVESPDPTIFGRLETKSGTSTRKKGSKVEENLPGRSCNIEETMTDQNISHAQEHDSSDDIQETKQIFMNKHRNVSKNWHIPSSFPSETVISAYSSPRVDKSTDPFAWGKPDHLVLRKLCWEKFGWTSQKADELLLPVLKEYNKNETQLRLEAFYTFNERFAKIRSKRIKKAVKGITGDHPSEFTDEPAEDLSKSRKNETGIPAELGISKSDTFKGTGESPDDMKPLNLKQSRKRKNSGDTVAKTESRKKGKLNAPVSASGLPKVDVQTGAEQAQPSDDNGLSQNRSNKGRGKGVRVPRGRRKRSLGTDSRKTTSSDSESDDHEPELHGINSRGTVGVRRSLRSRKSVNYAMDNIETEDTVASPDQSNKEDLNREQTDEIFSGLHGVCGNDDSGFSRHKESTKNLSPKKDLPRSYLESGGGFCNEEKTSHAGASNCDSSHDGDYRKVGGGFCLDDNETGSKHNEIHDDDDDYLRVGGGFFLDEDETGSKHNEIHDDLATMVDDSAELTRGCSGFVEEAECAKNITYKSSSVNETSGIELQDRGNSKLKSVMNHDSVNARSNYDQLESDTGVWISENAQGDTENAAVAFSAMPFLRKKRRKS 1825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0612 1825 PRINTS Xeroderma pigmentosum group G protein signature 39 56 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Acco01g0612 1825 PRINTS Xeroderma pigmentosum group G protein signature 133 155 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Acco01g0612 1825 PRINTS Xeroderma pigmentosum group G protein signature 91 114 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Acco01g0612 1825 MobiDBLite consensus disorder prediction 1571 1586 - -
Acco01g0612 1825 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 1179 1387 IPR036279 -
Acco01g0612 1825 ProSitePatterns XPG protein signature 1. 107 121 IPR019974 GO:0016788
Acco01g0612 1825 MobiDBLite consensus disorder prediction 1616 1631 - -
Acco01g0612 1825 Gene3D - 31 175 - -
Acco01g0612 1825 Gene3D - 1053 1178 - -
Acco01g0612 1825 FunFam DNA repair protein UVH3 1179 1236 - -
Acco01g0612 1825 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 109 128 IPR006084 -
Acco01g0612 1825 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 61 75 IPR006084 -
Acco01g0612 1825 MobiDBLite consensus disorder prediction 855 883 - -
Acco01g0612 1825 MobiDBLite consensus disorder prediction 1001 1045 - -
Acco01g0612 1825 MobiDBLite consensus disorder prediction 1450 1475 - -
Acco01g0612 1825 ProSitePatterns XPG protein signature 2. 1113 1127 IPR019974 GO:0016788
Acco01g0612 1825 Pfam XPG I-region 1113 1194 IPR006086 GO:0004518
Acco01g0612 1825 MobiDBLite consensus disorder prediction 505 558 - -
Acco01g0612 1825 MobiDBLite consensus disorder prediction 1397 1598 - -
Acco01g0612 1825 MobiDBLite consensus disorder prediction 1526 1553 - -
Acco01g0612 1825 MobiDBLite consensus disorder prediction 1030 1044 - -
Acco01g0612 1825 SUPERFAMILY PIN domain-like 39 1194 IPR029060 -
Acco01g0612 1825 Pfam XPG N-terminal domain 38 134 IPR006085 GO:0004518
Acco01g0612 1825 SMART xpgineu 1110 1179 IPR006086 GO:0004518
Acco01g0612 1825 CDD PIN_XPG_RAD2 39 129 - -
Acco01g0612 1825 CDD H3TH_XPG 1182 1325 - -
Acco01g0612 1825 Pfam Ubiquitin binding region 399 423 IPR025527 -
Acco01g0612 1825 Pfam Ubiquitin binding region 266 290 IPR025527 -
Acco01g0612 1825 MobiDBLite consensus disorder prediction 1397 1422 - -
Acco01g0612 1825 MobiDBLite consensus disorder prediction 963 983 - -
Acco01g0612 1825 CDD PIN_XPG_RAD2 1096 1180 - -
Acco01g0612 1825 MobiDBLite consensus disorder prediction 864 883 - -
Acco01g0612 1825 SMART xpgn3 38 135 IPR006085 GO:0004518
Acco01g0612 1825 FunFam DNA repair protein UVH3 1059 1178 - -
Acco01g0612 1825 MobiDBLite consensus disorder prediction 294 314 - -
Acco01g0612 1825 MobiDBLite consensus disorder prediction 505 556 - -
Acco01g0612 1825 Gene3D - 1179 1294 - -
Acco01g0612 1825 FunFam DNA repair protein UVH3 38 183 - -
Acco01g0612 1825 SMART HhH_4 1181 1214 IPR008918 GO:0003677|GO:0003824
Acco01g0612 1825 MobiDBLite consensus disorder prediction 1615 1663 - -
Acco01g0612 1825 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED 38 306 - -
Acco01g0612 1825 MobiDBLite consensus disorder prediction 1494 1514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0612 Acco-ChrAcco01 7164409 7176068 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0612 38 137 Core DNA Replication Machinery Family AT5G26680 38.182 3.02e-12 68.9