Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0608 ATGATTTCTGGCCGGTGTGCAGCTTGTAAGAGTCAAAGAAGAAAGTGCCCTTCAGATTGCATTTTCTCTCCATATTTTCCTCCCGACGATCCTCAAAGATTTGCTTGCGTTCACAGAATATATGGTTGCAGCAATGTCGGAAAAATGCTTCAGCAAATACCAGTGCAAATGAGAGCACAAGCCGTGGATACATTATATATGGAAGCAAGATGGAGGATAGAAGATCCAGTGTATGGTTGTGTTAAGCTTATTTCTCAGTTGCATCAGAACTTAGATGATACAGAAAGTGAATTAGCCAAAGTTAAAGCTCTTATTACCTTCTACAAGCTCCAAATCTCACAAGTTAATGAACTTCATCAACGCAACTTGGATTCTTCATAA 381 0.3937 MISGRCAACKSQRRKCPSDCIFSPYFPPDDPQRFACVHRIYGCSNVGKMLQQIPVQMRAQAVDTLYMEARWRIEDPVYGCVKLISQLHQNLDDTESELAKVKALITFYKLQISQVNELHQRNLDSS 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0608 126 Coils Coil 84 104 - -
Acco01g0608 126 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
Acco01g0608 126 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 115 - -
Acco01g0608 126 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0608 Acco-ChrAcco01 7150470 7151152 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0608 1 116 AS2 family AT3G26620 57.759 6.51e-48 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Acco01g0608 LOB 8.1e-37 No_clan