Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0604 ATGCAGCGTTTAACGGCGGGCGGCGGCGCGGGAAACACAGGGAAGAGAAGTGGCTCTGCTCTTTCGCTTCTGAGAATGGGTTCACCGAACATTAGGGACGTTTTAACAGCATTTAGTCCTTCGTTAGACTTGTTCGCTATCAGCGCGGGAGATGGTCGCATAAAGATATGGGATACACTAAATGGTCATATCCAGACGGAGTTGGCAGACATCACATCAAGTGATGCAACAAGTATGTATGCAGGATCAATGAAGGGTCATCTTTCAATAGATTATACGTGCATGAAGTGGTTGTCATTAGAAAGAAAGAAAAAAAGGAAACACACATCCTCATTGTTAGTACTTGGGACAGGTAGTGGTGACGTTTTGGCACTTGATGTGTCTGCTGGTCAATTAAATTGGAGAATTGGTGACTGCCATCCTGGAGGCGTGAAAGCTGTTTCATCTTCTGCAAATGGATCATGTGTTTATACTGCAGGTGCAGATGGAATGGTTTGCAAGATTGATTGTAAGACAGGAAACCTGTTGGAAAAATTCAAAGCTTCTACAAGGGCAGTATCCTGTATGTCTGTTTCTTCAGATGGGAAGACAATAGCTACTGCAGCAGCACAACTAAAGATTTTTAATTCTTCTGATAACAAAAAGATACAGAAGTTCTTTGGCCATCCTGGATCTGTTCGGTGTCTTGTCTTCACTGAAGATGGGAAGTATATTCTATCATCTGCTGTTGGTGAAAGATATGTTGCTGTTTGGAGGATTGATGGGGCTAAAAAGAAGTCAGTTAGTTGTGTTCTTGCTATGGAGCATCCTGCTGTTTTTCTTGATAGCAGCTGCACTCCTAGCAGGGAGCTTGACAATGTTGGCGTATGTATTTTGGCTATCTCAGAAGTTGGTGATTGTTATGTTTGGTTTGGAAATAGTATTGAAGAACTACGCGATGTGAAGCCCACTAAAATATCGTTATCTTTGGAAGAGATATCTTCCAGAAATTACATGGGTGCATCACCGGCAGTGTATGCTGCAAAGTTAGAAAGCATTAACAATCATACCTCAGGCCAGGTTTTACTTGTTCACGGATTGCTTGTAAAGCCTTCATTTCAAAAAATTTCAGTGCAATCTGGCTCGGACATAAAATTGAATTTCTCTGATGATGGTATTCTTCTTCGGCTGAACAAGTCCCTTGTGAAATCTAAGAAGGCAAAAGATGGAAAGAAAGTTACTGCTCTAGACCGTGCTAATGCGGAGGATGCTTTGCTCCCAATTCCTAAGCTTTATGATTCTCATGTGCAAGAGAAACAATTTCAAGACTCTTCAGGCATGGAGGTTATGGATGATTTGGTTAGAAGTAATGAATCTGTTTCCATGGAGATTGAAGATGAGATGGCCAAGGGTGAGACTGATGTGATCTGCGTGGAGGACCAGATGAGATCTCTTGGGATTCTTGACGATGAAAATAATCTTGAATCAAATATCAAATTTATCTCTTCATTGTTAAAGGGTGTTGATCTTGAAGCAACTCTTCCAATGAGAAAGATAAGAGCAACTGTCTTGACTATGGAGCCATCTGAAGCATATAAGCTCCTGGAAGTTTTGCTGAATGTTTGGCAATTAAGGTCATCTACTGGCAAGTATGCTCTTCCGTGGATATATAGCATATTAGTGATTCATGGTCACTACTTAATTTCTCAAGAAAATGTGACACATATGCTCGATTCCTTGATCAAGATGGCTGGCTCTAGAGGATCTGCAGTTGAGATTTTGTTACAGTTATCAGGCCGCCTGCAATTGGCGACAACACAGATTAACAAATCTTCTAAAAATACAACTCATTCAGTGAGAGATCGTCATATAGAAGAAAGCGAAGACGAGGACAAAGAGGATTATCTTGAAGAGGAAGGAGATGGTGCATCTGAAATAAGTAGTGATGGTGATGACAGTTAG 1941 0.4111 MQRLTAGGGAGNTGKRSGSALSLLRMGSPNIRDVLTAFSPSLDLFAISAGDGRIKIWDTLNGHIQTELADITSSDATSMYAGSMKGHLSIDYTCMKWLSLERKKKRKHTSSLLVLGTGSGDVLALDVSAGQLNWRIGDCHPGGVKAVSSSANGSCVYTAGADGMVCKIDCKTGNLLEKFKASTRAVSCMSVSSDGKTIATAAAQLKIFNSSDNKKIQKFFGHPGSVRCLVFTEDGKYILSSAVGERYVAVWRIDGAKKKSVSCVLAMEHPAVFLDSSCTPSRELDNVGVCILAISEVGDCYVWFGNSIEELRDVKPTKISLSLEEISSRNYMGASPAVYAAKLESINNHTSGQVLLVHGLLVKPSFQKISVQSGSDIKLNFSDDGILLRLNKSLVKSKKAKDGKKVTALDRANAEDALLPIPKLYDSHVQEKQFQDSSGMEVMDDLVRSNESVSMEIEDEMAKGETDVICVEDQMRSLGILDDENNLESNIKFISSLLKGVDLEATLPMRKIRATVLTMEPSEAYKLLEVLLNVWQLRSSTGKYALPWIYSILVIHGHYLISQENVTHMLDSLIKMAGSRGSAVEILLQLSGRLQLATTQINKSSKNTTHSVRDRHIEESEDEDKEDYLEEEGDGASEISSDGDDS 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0604 646 MobiDBLite consensus disorder prediction 623 646 - -
Acco01g0604 646 MobiDBLite consensus disorder prediction 608 622 - -
Acco01g0604 646 Gene3D - 22 334 IPR015943 GO:0005515
Acco01g0604 646 ProSiteProfiles Trp-Asp (WD) repeats profile. 37 67 IPR001680 GO:0005515
Acco01g0604 646 PANTHER OS03G0300300 PROTEIN 28 644 - -
Acco01g0604 646 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 36 261 IPR011047 -
Acco01g0604 646 Pfam Dip2/Utp12 Family 508 597 IPR007148 -
Acco01g0604 646 Pfam WD domain, G-beta repeat 215 251 IPR001680 GO:0005515
Acco01g0604 646 Pfam WD domain, G-beta repeat 31 58 IPR001680 GO:0005515
Acco01g0604 646 SMART WD40_4 129 169 IPR001680 GO:0005515
Acco01g0604 646 SMART WD40_4 20 58 IPR001680 GO:0005515
Acco01g0604 646 SMART WD40_4 212 252 IPR001680 GO:0005515
Acco01g0604 646 SMART WD40_4 172 209 IPR001680 GO:0005515
Acco01g0604 646 MobiDBLite consensus disorder prediction 602 646 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0604 113 277 U-box Gene Family AT2G33340 25.000 3.45e-06 48.1