Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0600 ATGGCGACGGAGCAGTTGATGTCTGGTGGTGTTCCCCGCTACGTTCAAATGCAATCGGAGCAGTCGACGGCGTTTTCTTCTTCTGCGTCATTCCGATTTGGCGGTGGCCCTGAGTCTACTCGAATTTTCGATGAGTTGCCAGAAGCCATCATCGTCTCCGTCTCTCGTCCCGATGCCGGCGACATCAGTCCCATGCTTCTTTCTTACACAATTGAGTTTCGTTATAAGCAGTTCAAGTGGCAATTGGTGAAGAAGGCTTCTCACGTATTTTATTTGCATTTTACATTGAAGAAACGTGCCTTTATTGAGGAAATTCATGAGAAGCAAGAGCAGGTTAAAGAATGGCTTAACAATCTAGGAATAGTAGAACACACTGCTGTTGTACAAGATGATGATGAAGCTGATGATGAAACTGTTCATCTACATCATGATGAAAGTGCTAAGGACAGAGATGTACCATCTATTGCTGCTCTACCAATTATACGGCCAGCCATAGGTAGACAGGATATTATGTCAGACAGAGCAAAGACTGCAATGCAAGGATATTTGAATCACTTTTTAGGAAATATTAATATTGTTAACTCTCCAGAGGTTTGCAAGTTTTTGGAGGTATCAAAGTTATCTTTCACAACTGAGTATGGCCCTAGCCTGAAGGAAGATTATGTGATGGTTAAGCATCTGCCAACAGTTCCTAAGGATGATGATTCCAGAAAATGTTGTTCATCTTGGTGTTTTAGTTGTTGCAATGACAACTGGCCGAAGGTTTGGGCTGTCTTGAAACCTGGATTCTTAGCATTGCTGGCTGATCCATTTGATAGCCAACCTTTGGACATAATTGTTTTTGATGTTCTCCCTGCCTCAGATGGGAATGGGGATGGTCGTTTATCACTGGCAAAAGAAATAAAAGAACGAAATCCTTTACGTCATTCATTCAAGGTGACTTGTGGAAACCGAAGCATTAGGATAAGAGTAAAAAGTAGTGGTAAAGTCAAAGATTGGGTTGCTGCAATTAATGATGCTGGTCTCAGGCCTCCTGAAGGATGGTGTCATCCTCATCGCCATGGTTCATTTGCTCCTCCAAGAGGCTTGATTGAAGATGGAAGTCAGGCCCAGTGGTTTGTTGATGGCAGGGCAGCATTTGAAGCCATAGCTTCTTCAATTGAGGATGCTAAATCAGAGATATTTATTTGTGGGTGGTGGGTTTGCCCGGAACTGTATTTGCGGCGTCCTTTTCATACTCACGCTTCATCAAGGCTTGATAATTTGCTGGAAGAAAAAGCTAAGCAAGGGGTTCAGATCTACATTCTTCTATATAAAGAGGTGGCCCTTGCTTTGAAAATTAACAGCGACTATAGCAAGAGAAAGCTTCTTAGCATTCACGAAAATGTGAGGGTACTACGCTATCCTGACCACTTTTCTTCTGGTGTTTACCTGTGGTCACACCATGAAAAACTTGTCATTGTTGATCACCAGATTTGTTTTATTGGAGGATTGGATTTATGCTTTGGTCGTTACGATACATCTAAACACACAGTGGGAGATTCCCCTCCCTTGATATGGCCAGGAAAGGACTATTATAATCCCAGGGAATCCGAGCCAAATTCATGGGAAGATTCAATGAAAGATGAATTCGATCGTGTAAAATATCCTCGAATGCCATGGCATGATGTTCATTGTGCCCTTTGGGGACCACCTTGTCGTGACATTGCTAGGCATTTTGTTCAGCGATGGAATTATGCAAAGAGGAATAAAGCTCCAAATGAGCAAGCAATTCCATTACTCATGCCCCAGCATCATATGGTTATCCCACACTACTTGGGAAGAAGCAAAGAAGTGGAGATTGAAAGCAAGAATACTGACTATCATATAGACACGAAGAGGGAAGATTCCTTTTCCTCACCCCAAGATGTTCCTCTCCTTTTACCTGAGGACTCTGGTGGGATGGATGCTCCTGTCGGAGACACAGCATTAAATGAGTTAAGCTCCTTTTTACATCACCTTGACCGGCCAACCAGGGTCAGCAGTGGTCATCCTTTTTCTTTCCGGAAGGCCAAAATTGAACCAATAGGTCCAGATACACCAATGAAGGGCTTTGTAGATGATCTTGACTCAGTGGATCATCATGGGAAGATGCCTATGGATAGAATAGCTCACATTAGTGTACACAATTCAGGTCCAGAATGGTGGGAGACACAAGAACGTGGTGACCAAGGAAGTTTTGTAGATGAATCTGGCGAAGTTGGTCCTCGTGTATCCTGCCGTTGTCAGGTTATTCGGAGTGTCAGTCAATGGTCTGCTGGAACTAGCCAAACAGAAGATAGTATCCACAATGCTTATTGCTCTCTTATTGAGAAAGCAGAACACTTCATCTACATTGAGAATCAGTTTTTTATCTCAGGTCTTTCAGGAGATGAGATGATACGAAATCGTGTTTTGGAAGCTTTATATCGACGGATTATGCGAGCTTACCATGACAAAAAATCATTTAGGGTCATAATTGTCATACCCCTCCTGCCTGGCTTCCAGGGAGGCCTGGATGATAGCGGTGCAGCATCCGTCAGAGCAATAATGCATTGGCAGTATCGAACCATTTGTAGAGGACAAAACTCTATATTACATAATCTATTTGAATTTCTTGATTCAAAAATACATGATTACATCTCTTTCTATGGCCTTAGGGCTTATGGTAGACTCTTTGATGGTGGTCCTGTGGCAACCAGCCAGGTGTATGTTCACAGTAAAATCATGATTGTTGATGACTGTACAACTTTGATTGGATCTGCTAATATTAATGATAGGAGTTTACTTGGCTCCAGAGATTCTGAGATTGGTGTAATTATAGAAGACAAAGAATCGATCAATTCTTTTATGGGGGGAAAATCATGGAAAGCAGGAAAATTCTCTCTGACACTGCGGTTGTCATTATGGTCTGAACACTTAGGCCTGCAAGCAGGGCAGATCAATCAAATAATGGACCCAATTGCTGAGTCGACATATAAGGATATTTGGATAGCGACAGCAAAGACAAATACTGCAATTTATCAGGATGTTTTTTCTTGTGTACCTAATGATCTGATACACACCAGACTTGCTTTCAGGCAAAGCACAGCTATCTGGAAAGAGAGAATTGACCATACTACCATTGATTTAGGAATAGCCCCAGAAAATTTAGAATCCTATGAAGATGGAGGTATCAAGAAAACTGACCCTTTGGAAAGATTGGCATCAGTGAAGGGTCACCTTGTTTCCTTTCCCTTGGAGTTCATGTGCCAAGAAAATCTAAGACCTGCTTTTAATGAAAGCGAATACTATGCTAGCACTCAGCTCCGGACAGTGTGTACAGAAGTTCCCTGTAGGTTTCTTCTTCTTCTTCTTAGTCCAGAAACTTTTACACGAGGCAAAGCCCTGAAATGGGGACACCCTCCCGAATAA 3432 0.4234 MATEQLMSGGVPRYVQMQSEQSTAFSSSASFRFGGGPESTRIFDELPEAIIVSVSRPDAGDISPMLLSYTIEFRYKQFKWQLVKKASHVFYLHFTLKKRAFIEEIHEKQEQVKEWLNNLGIVEHTAVVQDDDEADDETVHLHHDESAKDRDVPSIAALPIIRPAIGRQDIMSDRAKTAMQGYLNHFLGNINIVNSPEVCKFLEVSKLSFTTEYGPSLKEDYVMVKHLPTVPKDDDSRKCCSSWCFSCCNDNWPKVWAVLKPGFLALLADPFDSQPLDIIVFDVLPASDGNGDGRLSLAKEIKERNPLRHSFKVTCGNRSIRIRVKSSGKVKDWVAAINDAGLRPPEGWCHPHRHGSFAPPRGLIEDGSQAQWFVDGRAAFEAIASSIEDAKSEIFICGWWVCPELYLRRPFHTHASSRLDNLLEEKAKQGVQIYILLYKEVALALKINSDYSKRKLLSIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDHQICFIGGLDLCFGRYDTSKHTVGDSPPLIWPGKDYYNPRESEPNSWEDSMKDEFDRVKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPNEQAIPLLMPQHHMVIPHYLGRSKEVEIESKNTDYHIDTKREDSFSSPQDVPLLLPEDSGGMDAPVGDTALNELSSFLHHLDRPTRVSSGHPFSFRKAKIEPIGPDTPMKGFVDDLDSVDHHGKMPMDRIAHISVHNSGPEWWETQERGDQGSFVDESGEVGPRVSCRCQVIRSVSQWSAGTSQTEDSIHNAYCSLIEKAEHFIYIENQFFISGLSGDEMIRNRVLEALYRRIMRAYHDKKSFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLFEFLDSKIHDYISFYGLRAYGRLFDGGPVATSQVYVHSKIMIVDDCTTLIGSANINDRSLLGSRDSEIGVIIEDKESINSFMGGKSWKAGKFSLTLRLSLWSEHLGLQAGQINQIMDPIAESTYKDIWIATAKTNTAIYQDVFSCVPNDLIHTRLAFRQSTAIWKERIDHTTIDLGIAPENLESYEDGGIKKTDPLERLASVKGHLVSFPLEFMCQENLRPAFNESEYYASTQLRTVCTEVPCRFLLLLLSPETFTRGKALKWGHPPE 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0600 1143 CDD PLDc_vPLD1_2_yPLD_like_1 370 514 - -
Acco01g0600 1143 SUPERFAMILY PH domain-like 247 340 - -
Acco01g0600 1143 SUPERFAMILY Phospholipase D/nuclease 327 596 - -
Acco01g0600 1143 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 477 504 IPR001736 GO:0003824
Acco01g0600 1143 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 907 934 IPR001736 GO:0003824
Acco01g0600 1143 CDD PLDc_vPLD1_2_yPLD_like_2 767 951 - -
Acco01g0600 1143 Gene3D Endonuclease Chain A 701 968 - -
Acco01g0600 1143 SMART PH_update 216 344 IPR001849 -
Acco01g0600 1143 PANTHER PHOSPHOLIPASE D 170 1100 IPR015679 -
Acco01g0600 1143 Pfam Phospholipase D Active site motif 477 504 IPR001736 GO:0003824
Acco01g0600 1143 CDD PH_PLD 193 340 - -
Acco01g0600 1143 SUPERFAMILY Phospholipase D/nuclease 749 953 - -
Acco01g0600 1143 FunFam Phospholipase 741 961 - -
Acco01g0600 1143 Coils Coil 98 118 - -
Acco01g0600 1143 Pfam PLD-like domain 780 954 IPR025202 -
Acco01g0600 1143 Gene3D - 245 342 IPR011993 -
Acco01g0600 1143 Gene3D Endonuclease Chain A 364 601 - -
Acco01g0600 1143 PIRSF PLD_euk 606 1111 IPR016555 GO:0004630|GO:0006654|GO:0048017
Acco01g0600 1143 PIRSF PLD_euk 53 620 IPR016555 GO:0004630|GO:0006654|GO:0048017
Acco01g0600 1143 SMART pld_4 907 934 IPR001736 GO:0003824
Acco01g0600 1143 SMART pld_4 477 504 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0600 Acco-ChrAcco01 7038527 7050777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0600 1 987 Phospholipase D Gene Family (Wang group) AT3G16785 72.088 0.0 1385