Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0595 ATGAATTCGAATTATGGCAAACCCAATAATCAAACGAGTGCTCCGTCTGCCTCACTGAAGAACATCAAGTTCGACTTTGATCTCGGGATCGGATCCAATCAACCAAAATCTCTGAACGATCAGAAAAACCCAAAATCTTCCCATCCATATTCTTCTTCCTCATCTTCATATTCATTTGCGCAACCCAGACCCTCGTGGCAACCCAACAAGCCATCATGGACTCACCAGCCTGCACCGAATCTGGCGAACCAGTGTGGATTGCCGGGTGGACCCACTTCAATGGTGGGAGATATCTTTGGCAAGACTTGGGGGTCTACTCAACCTTCGGGTTCTAGTTCGACCATTGGAGTTGTTAATAAAAACCCTAATCTCTTTGGAGATTTGGTGAGCTCTGCAATGGGAGAGAGTTCTAATATTAGCAGTAATACTCCTATAAATTCGATTCCTGTTTCTAAGGCGTCAAGTACAAGTACTACATCGAACAAGAGCTCCTTTTCGATGGGAAATATGGCGGATGCTTTGCCTAAAACTAGCAACACGACGACGAGTAGTGGAAGTTGGGGATCTTCCGGGTACAATAATACTAGCATGGACGCTAATAAAACCCCAAATCTTGGTGGTCCTTCAATGCGAAGTATGAATAGCGGCAGTTCAGCTGGAATTGGAATGAATGTTAATAGAGATCCATTCAGCTCTTTGCCTGGATTTGGATCAAAACCATCTGGTAGTCTTAATTCAGCTGGAATGGCCACAAGAAATAATAAAGCAGAGGATGATGGTTTTGGGGATTTCCAGAAAGCTTCCAAACCAGCCTCTACAACATTCCCATCAAGCACTTCCACTGCAGATAATATCAGTTTTACAGGATTTACCAATGTGAATCAGAACCCTATGCAGAGATCTGCTGGTGGAGACCCTATAGACATGTTGTTCTCATCTTCATCAGCTTCTGCTGGAAGTGCTCAGGTGACTTCCGAAGTATTTGGAGGAAAATCATCTTCTAACATTGATGATTGGGGTTTGGATTCTGAATTTGGTGGAGGAGGACATGATGATGGTGTTACAACCACGGAGCTTGAAGGTCTTCCACCTCCTCCTTCTGGGCTATCGGGTTCTACGGCAAAAGGGAAAGGGATGGACAATTACAAGCAAGGTCAATTTGCAGATGCTATTAAGTGGCTATCTTGGGCTGCCATCCTTCTTGAGAAAACAGAGGATAATGCTGGTATGACAGAGGTGTTGTCATGCAGAGCCTCATGTTACAAAGAAGTTGGAGAGTATAAAAAAGCAGTGGCCGATTGTACAAAGGTGCTAGAAAACGATGACACAAATGTATCTATATTGGTGCAACGTGCTCTCTTGTATGAGAGCATGGAAAAGTACAAGCTTGGTGCAGAAGATCTGAGGACTGTTCTAAAGATTGATCCTGGTAATAGGGTTGCGAGAAGTACCGTTCATCGTCTGACAAAGCTGGCTGATTAG 1482 0.4406 MNSNYGKPNNQTSAPSASLKNIKFDFDLGIGSNQPKSLNDQKNPKSSHPYSSSSSSYSFAQPRPSWQPNKPSWTHQPAPNLANQCGLPGGPTSMVGDIFGKTWGSTQPSGSSSTIGVVNKNPNLFGDLVSSAMGESSNISSNTPINSIPVSKASSTSTTSNKSSFSMGNMADALPKTSNTTTSSGSWGSSGYNNTSMDANKTPNLGGPSMRSMNSGSSAGIGMNVNRDPFSSLPGFGSKPSGSLNSAGMATRNNKAEDDGFGDFQKASKPASTTFPSSTSTADNISFTGFTNVNQNPMQRSAGGDPIDMLFSSSSASAGSAQVTSEVFGGKSSSNIDDWGLDSEFGGGGHDDGVTTTELEGLPPPPSGLSGSTAKGKGMDNYKQGQFADAIKWLSWAAILLEKTEDNAGMTEVLSCRASCYKEVGEYKKAVADCTKVLENDDTNVSILVQRALLYESMEKYKLGAEDLRTVLKIDPGNRVARSTVHRLTKLAD 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0595 493 PANTHER OS03G0340700 PROTEIN 1 493 - -
Acco01g0595 493 MobiDBLite consensus disorder prediction 28 116 - -
Acco01g0595 493 Gene3D Tetratricopeptide repeat domain 371 492 IPR011990 GO:0005515
Acco01g0595 493 MobiDBLite consensus disorder prediction 32 81 - -
Acco01g0595 493 Pfam Tetratricopeptide repeat 447 477 IPR019734 GO:0005515
Acco01g0595 493 MobiDBLite consensus disorder prediction 342 376 - -
Acco01g0595 493 SMART tpr_5 445 478 IPR019734 GO:0005515
Acco01g0595 493 SMART tpr_5 411 444 IPR019734 GO:0005515
Acco01g0595 493 SMART tpr_5 371 404 IPR019734 GO:0005515
Acco01g0595 493 MobiDBLite consensus disorder prediction 134 205 - -
Acco01g0595 493 MobiDBLite consensus disorder prediction 99 116 - -
Acco01g0595 493 SUPERFAMILY TPR-like 375 483 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0595 Acco-ChrAcco01 6921546 6923792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0595 386 488 Calmodulin-binding Proteins AT3G25230 32.075 2.35e-09 57.8