Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0582 ATGATAATGCAGCTTCATAAACTCTCCATTTTGCTCACTCTCTTCCTGGTTTTGCTTCCTCTGGTAAAACCAGATCTGGCTTCTGAGAAACTCGCTCTCGTCTCGCTCCGTTCGGCCGTCGGAGGCCGAACCCTATTTTGGAACGTTTCAGAGCAGAGTCCATGCAAGTGGTTCGGAGTTCGCTGCAAAAACGACGTCGTCGTCCAGCTTCATCTTCCCGGCTTTGCACTTTCCGGCTCAATACCCACCGGTATTTTCGGCAACTTGACTCATCTTCGAACTCTGAGCTTGCGTTTCAATGCTCTAAAAGGTGTGCTTCCTCAAGATCTCGCTTCTTGTGTTCATCTTCATAGCCTTTACTTGCAACAGAATCTTCTCTCCGGTGAAATTCCAGAATCCCTGTTTGCTTTACATGACTTGTTCCAGCTTAATTTGGCTTCCAACAAATTTTCCGGTTCAATTCCGTTGGGTTTCAACAATTTGACGAGGCTGAAAACTTTGTTCCTTGAAAATAACAATCTCTCTGGTGCTATCCCCCAGTTAAACCTTGTAAAGCTTGAACAATTCAATGTCTCAAACAATATGCTGAATGGTTCTGTTCCAGAAAAGTTACAAGCTTTCTCAAGAAATTCGTTTCTAGGAAACTCTCTGTGTGGCAAACCCCTCAATCTTTGCCCAGGAAATGTAAATGGAACGGGAACGGGAACGGGAACGGGAACGGGAACCGGAGCCGGAGCCGGAGCCGGAAAATCTCCAAAGCCGGAGATTGATAACAGTGAGAGAAACATGAAGAAGAAGAAACTGTCAGGTGGTGCCATTGCTGGAATCGTTGTAGGATCAGCAGTTTGTCTTCTGTTGATTGTCTTCGCTCTGATCATATTGTGCCGAAAGGGCAGTAATCCGAAGACAAGGTCTCTGGATATTTTAACTGAGAAGCAGCTTGAAGTTTCAGAATTGGAACACAGTAATGGCTACTCGGCTGCTGCGGGGGCAACTGCGGCTGTGACAGCGACGGAGGCCAGTGCCGGAGCGAAAAAGCTGGTATTTTTCGGTCATTCATCGAAAGTATTTGATCTTGAGGACTTGCTTAGGGCTTCTGCAGAAGTTTTGGGTAAAGGAACATTTGGAACAGCTTATAAGGCGACTATGGAGGATGGGCCTGTGGTGGCGGTGAAGCGATTGAGGGATGTGACGATTTCTGATTCAGAGTTCAAAGAGAAAATTGAAGCAGTAGGAGCAATGGATCATGAGAATTTAGTACCTCTCAAGGCTTACTACTATAGCAGAGAAGAAAAGCTTCTTGTCTATGATTACATACCCACAGGAAGTTTGTCTGCACTCTTGCATGGAAACAAAGGGACTGGTAGGAACCCACTGAATTGGGAGGTGAGATCAGGCATTGCTCTTGGAGCTGCTAGAGGCATTGAGTACTTACACTCACAAGGGACTAATGTTTCTCATGGAAACATAAAGGCGTCCAACATCCTCATCTCCAGATCATTGGATGCTAAAGTCTCTGACTTTGGCCTCACGCACCTTGCCAGTCCCACCTCCTCCACTCCAAACCGAGTTACCGGGTACCGTGCACCTGAGGTAACTGATCCCCGCAAGGTATCTCAAAAAGCAGATGTTTATAGCTTTGGAGTATTGCTCTTAGAATTGCTTACTGGGAAGGCTCCGGCTCATGCCCTCTTGAACGATGAAGGAATAGACCTCCCTAGATGGGTTCAATCTGTTGTTAGAGAAGAGTGGACCTCTGAGGTGTTTGATATTGAGCTTCTTAGGCATCAAAATGTCGAGGAGGAGATGGTTCAGTTGTTGCAACTTGCAGTGGAGTGTGTCGCTCCGCACCCAGATAACCGCCCATCGATGTCAGAAGTGACAAAGCACATTGAGGAGTTACGAGAGGCTACCTTGAAACGTGATGAAGACCGAGCACAGAATCCCGATCAAATCAAGGATATGGATGATATATCTTCTCACTGA 1986 0.4648 MIMQLHKLSILLTLFLVLLPLVKPDLASEKLALVSLRSAVGGRTLFWNVSEQSPCKWFGVRCKNDVVVQLHLPGFALSGSIPTGIFGNLTHLRTLSLRFNALKGVLPQDLASCVHLHSLYLQQNLLSGEIPESLFALHDLFQLNLASNKFSGSIPLGFNNLTRLKTLFLENNNLSGAIPQLNLVKLEQFNVSNNMLNGSVPEKLQAFSRNSFLGNSLCGKPLNLCPGNVNGTGTGTGTGTGTGAGAGAGKSPKPEIDNSERNMKKKKLSGGAIAGIVVGSAVCLLLIVFALIILCRKGSNPKTRSLDILTEKQLEVSELEHSNGYSAAAGATAAVTATEASAGAKKLVFFGHSSKVFDLEDLLRASAEVLGKGTFGTAYKATMEDGPVVAVKRLRDVTISDSEFKEKIEAVGAMDHENLVPLKAYYYSREEKLLVYDYIPTGSLSALLHGNKGTGRNPLNWEVRSGIALGAARGIEYLHSQGTNVSHGNIKASNILISRSLDAKVSDFGLTHLASPTSSTPNRVTGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPAHALLNDEGIDLPRWVQSVVREEWTSEVFDIELLRHQNVEEEMVQLLQLAVECVAPHPDNRPSMSEVTKHIEELREATLKRDEDRAQNPDQIKDMDDISSH 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0582 661 MobiDBLite consensus disorder prediction 637 661 - -
Acco01g0582 661 FunFam Probable inactive receptor kinase At1g48480 439 642 - -
Acco01g0582 661 Gene3D Ribonuclease Inhibitor 27 182 IPR032675 -
Acco01g0582 661 ProSitePatterns Protein kinases ATP-binding region signature. 370 392 IPR017441 GO:0005524
Acco01g0582 661 Gene3D Transferase(Phosphotransferase) domain 1 439 659 - -
Acco01g0582 661 Pfam Leucine rich repeat 80 126 IPR001611 GO:0005515
Acco01g0582 661 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Acco01g0582 661 Gene3D Ribonuclease Inhibitor 183 225 IPR032675 -
Acco01g0582 661 SUPERFAMILY Protein kinase-like (PK-like) 368 632 IPR011009 -
Acco01g0582 661 PANTHER OS05G0588300 PROTEIN 11 641 - -
Acco01g0582 661 MobiDBLite consensus disorder prediction 236 263 - -
Acco01g0582 661 FunFam pollen receptor-like kinase 1 333 438 - -
Acco01g0582 661 Pfam Protein kinase domain 367 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0582 661 FunFam Probable inactive receptor kinase RLK902 26 182 - -
Acco01g0582 661 ProSiteProfiles Protein kinase domain profile. 364 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0582 661 Gene3D Phosphorylase Kinase; domain 1 329 438 - -
Acco01g0582 661 SUPERFAMILY L domain-like 41 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0582 Acco-ChrAcco01 6802791 6805499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0582 25 635 Receptor kinase-like Gene Family AT1G48480 61.958 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco01g0582 Pkinase 5e-40 CL0016