Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0576 ATGAGTGGTGATAAAAGAGAAGAATATTCTGCATTATCTGAGAAAGATGAGCAAGAAGAAGTGGATAATATTGAAGAGAAAGATGATGACATCCTCAAGAGCAGAATCTCAAACCATCCTCTCTATGATCTTCTAGTTGAACAACACCTCAACTGTTTGAAGGTGACGGGTGACATTTCCAACCTGGAAAAAGTGAAGAAGAGAGATAGAAAGAAAAAGGCAATAATGAAGAAGCAAAACCTTGGCATGTTTAATCATTCAGAGCTGGATCACTTCATGGAAGCATATTGTATGGCACTAGGGAAGCTGAAAGAAGCAATGGAGGAGCCTCAAACAGAGTCATTGGCTTTCATCAGCAACATGCATTCTCAACTCAGAGACCTCACTGATGGATTGACCCTCTCTTCTCCTTCTTCTTCTACTTCCAAACACAGCCTTAAAGATAGCATCTGA 453 0.4018 MSGDKREEYSALSEKDEQEEVDNIEEKDDDILKSRISNHPLYDLLVEQHLNCLKVTGDISNLEKVKKRDRKKKAIMKKQNLGMFNHSELDHFMEAYCMALGKLKEAMEEPQTESLAFISNMHSQLRDLTDGLTLSSPSSSTSKHSLKDSI 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0576 150 Pfam KNOX1 domain 32 55 IPR005540 GO:0003677|GO:0005634
Acco01g0576 150 MobiDBLite consensus disorder prediction 130 150 - -
Acco01g0576 150 MobiDBLite consensus disorder prediction 1 17 - -
Acco01g0576 150 SMART KNOX2_2 79 130 IPR005541 GO:0003677|GO:0005634
Acco01g0576 150 MobiDBLite consensus disorder prediction 1 29 - -
Acco01g0576 150 SMART KNOX1_2 30 74 IPR005540 GO:0003677|GO:0005634
Acco01g0576 150 Pfam KNOX2 domain 87 129 IPR005541 GO:0003677|GO:0005634
Acco01g0576 150 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 12 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0576 Acco-ChrAcco01 6728535 6730354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0576 24 132 Homeobox Transcription Factor Family AT1G23380 30.252 1.17e-10 56.6