Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0548 ATGGCTAACCTTTTATCTAAACGCTGCCGCCCCAACCTCAGCCTTAGTCTACCAAAGCCCTCCCCTTGGATCCCCATCCCCACCTCGTCCTCCTCCTCCGCCGGAGACCTCACTCTTGATGACGTCGAAAAGCTTCAAGTTCTTGGCCACGGAAATAGTGGCACCGTCTACCGAGTTCGCCATAAGCGAACTTCTTGTGTCCATGCTTTGAAGGTCGTCCATGCCTATTTCGACCCGATGACTTTGCGGCAAGTTCGGCGGGAGATAGACATCCTCCGACGGACGGACTCGCCAAGCATAGTACAGTTCCACGGTTCCTTCGAGGCACCGTCCGGCGACGTAGGGATTTTGCTAGAGCACATGGACTTGGGAACGTTGGACACACTGCTGAAGAATAAAGGCGCCTTCTCTGAATCCCAAATCGCAGCGGTGGCGCGTCAAGTTCTGGCCGGGCTAAGCTATCTCCACGAGAACAAGATCGTCCACCGTGATATCAAGCCGTCAAACCTCCTCGTGAATCAGAATATGGAAGTGAAGATCAGCGATTTCGGAGTCAGCAAGGTCTTGTCTAGGACGTTGGACACGTGTGATTCATACGTCGGTACGTGCGCCTACATGAGCCCGGAGCGGTTCAACCCGGATAGTTATGGCGGGAATTATAACGGGTATGCTGCTGATATATGGAGTCTGGGCCTCACGTTATTCGAACTCTATGTGGGTCATTTTCCTCTTCTACCCGCCGGTCAGAGACCCGAATGGGCTAAATTGATGTGTGCCATTTGTTTCAACGATCCACCGGCCTTGCCGGAGAGCGCGTCCGACGAGTTTCGGAGTTTCATGAATTGCTGCTTGAAGAAGGAATCAAGTGAGAGATGGACTGCCTCTCAGCTTCTAACTCACCCGTTTCTATCTCAACAATAA 921 0.5255 MANLLSKRCRPNLSLSLPKPSPWIPIPTSSSSSAGDLTLDDVEKLQVLGHGNSGTVYRVRHKRTSCVHALKVVHAYFDPMTLRQVRREIDILRRTDSPSIVQFHGSFEAPSGDVGILLEHMDLGTLDTLLKNKGAFSESQIAAVARQVLAGLSYLHENKIVHRDIKPSNLLVNQNMEVKISDFGVSKVLSRTLDTCDSYVGTCAYMSPERFNPDSYGGNYNGYAADIWSLGLTLFELYVGHFPLLPAGQRPEWAKLMCAICFNDPPALPESASDEFRSFMNCCLKKESSERWTASQLLTHPFLSQQ 306
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0548 306 SMART serkin_6 42 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0548 306 Gene3D Phosphorylase Kinase; domain 1 25 122 - -
Acco01g0548 306 CDD PKc_MAPKK_plant_like 40 303 - -
Acco01g0548 306 Gene3D Transferase(Phosphotransferase) domain 1 124 306 - -
Acco01g0548 306 Pfam Protein kinase domain 43 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0548 306 FunFam Mitogen-activated protein kinase 2 123 306 - -
Acco01g0548 306 SUPERFAMILY Protein kinase-like (PK-like) 20 304 IPR011009 -
Acco01g0548 306 ProSiteProfiles Protein kinase domain profile. 42 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0548 306 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Acco01g0548 306 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 29 305 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco01g0548 Acco-ChrAcco01 6496141 6498739 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0548 4 305 MAP Kinase Kinase Gene Family AT1G18350 57.329 6.58e-125 357
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Acco01g0548 Pkinase 3e-64 CL0016