Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0537 ATGTTCCAGAAGCTCATTTCCCGTGGACCCCATCCGCATCCAAAAGGACACATGTATAGATGGAGGGAGAAAAAAGTGACGGGGCCATTTCCCTGTTACGGGCTCTTGCCAACTTGCTCAAGAAGGAGAGTGTCGAACAAGGAAGGAGGCCATAGGGACAGAGTTAGGAAGCGGTTGTCTCTTTTTGCTGTGCTCATCATGGTAAGAAAAAGGAGAACTGAAGCACCTAGTGGAGCTGAAAGCTCTGAGACTCATGAGAGTGGGGGCACAAGTCGAGGACCTCAACACCATGGTGAAAGAAGTGCTCCACCCCCACAGCAGGCAACAGGAGGGGGAGGATCACAAGGAGGTAGAGGTAGGGGTCCTCAAGGAGGACGGGGAGGTTATGGTGGGGGCCGGGGTCGTGGGATGCCCCAACAGCAGCATGGATCACCCCCTGAATATCAAGGAAGAGGAAGGGGAGGGTACTCTCAGCAGTTAGGTCGTGGACATGTTGGTGGGGGAAATGGCAGTGGCAGTGGTAGTGGCCCGTCTTATGGTGGCCCATCTGGACCTCAAGCACCCGAGCTGCACCAAGCTACCCCTCTTCCACATCCTGCTGGGGTGACTCCAACATCTGAGGCCAGCTCTTCTTCCCAACAGTTTGATCCCTCACAAGTGGAACAACAAATGGGGCAAATGACGATTCATTCAGAATCTGTTTCTCCCGCCCCACCCTCAAGTAAATCAGTGAGGTTTCCCCTTAGGCCTGGAAAGGGTAGCTATGGCACCAAGTGTGTAGTTAAAGCTAACCACTTCTTTGCTGAGTTACCTAATAAAGACTTGCATCAGTATGATGTAACTATCACTCCAGAAATGACATCAAGGGGTGTCAACCGTGCTGTTATGGATCAGCTGGTGAGGCTATATCGAGAATCTCATCTGGGTAGGAGACTTCCTGCATATGATGGGCGCAAGAGCCTTTACACTGCGGGTCCTCTTCCTTTCATTTCAAAGGAGTTTAAAATCATTCTGCTTGATGAAGATGATGGATCAGGAGGACCAAGGAGAGAGAGAGAGTTCAAAGTTGTGATAAAAATGGCTGCCCGAGCTGATCTACATCATCTAGGACTCTTCCTGCAGGGAAGACAGACTGATGCTCCTCAAGAAGCTCTTCAGGTTCTTGACATTGTGCTGCGGGAATTACCTACCTCTAGGTATTGTCCTGTAGCAAGATCATTTTATTCACCAGATCTGGGTAGAAGGCAACCATTAGGTGACGGTTTGGAAAGTTGGCGTGGTTTCTATCAAAGTATTCGTCCTACTCAGATGGGATTATCTCTCAACATTGACATGTCCTCAACTGCATTCATTGAACCATTGCCAGTAATAGATTTTGTTACTCAGTTACTCAATCGTGATGTCACCTCACGCCCGTTGTCTGATGCAGATCGCGTAAAGATAAAGAAAGCTCTTCGTGGTGTCAAAGTTGAAGTGACACACCGTGGAAATATGAGGAGAAAATATCGCATCTCTGGTCTGACTTCACAAGCAACTAGAGAGCTTACGTTTCCTGTTGATGCAAGTGGAACAATGAAGTCTGTTGTTGAATACTTTTCGGAAACATATGGATTTGTCATTCAACATACCCAGTGGCCTTGCTTGCAAGTGGGCAATGCGCAGAGACCAAACTATTTACCAATGGAGGTTTGTAAGATAGTAGAAGGTCAAAGGTACTCAAAGAGGCTGAATGAAAAGCAGATTACCGCTTTGCTCAAAGTCACATGCCAGCGTCCTGTTGAAAGGGAGCGTGACATTATGCAGACAGTTCACCATAATGCTTATCGTGATGACCCTTATGCTAAAGAGTTTGGGATTAAAATCAGTGAAAAGCTAGCGCAAGTTGAAGCTCGCATCCTTCCTGCACCTCGGCTTAAATACCACGAGACAGGTAGGGAAAAGGATTGCCTACCTCAAGTTGGCCAATGGAACATGATGAACAAGAAAATGGTCAATGGTGGGACTGTCAACCACTGGATCTGCATCAATTTTTCCCGAAATGTTCAAGAGGGTGTCGCGAGTGGGTTTTGTTATGAACTTGCTCAAATGTGCTATATATCTGGCATGGCATTCAATCCTGAGCCAGTACTTCCCCCGTACAGTGCCCGTCCTGACTTGGTGGATAAGGTTCTCAAAACTCGATATCATGATGCAAAAGCCAGACTGAAGAAGGATCAACAGCTTGATCTTCTGATTGTTATTTTGCCTGATAATAATGGCTCTCTTTATGGTGACCTGAAACGAATATGTGAGACAGATCTTGGGGTTGTTTCTCAGTGCTGTTTGACCAGGCATGTCTTTAAAATGAGCAAGCAGTATCTTGCTAATGTTGCCCTGAAAATCAATGTAAAAGTTGGTGGAAGGAACGCGGTGCTTGTTGATGCACTTTCACGGCGTATACCTCTAGTCAGCGATCGGCCGACAATTATATTTGGTGCTGATGTTACTCATCCACATCCTGGAGAGGATTCAAGTCCTTCCATAGCAGCAGTTGTGGCCTCTCAAGATTGGCCTGAAATCACTAAGTATGCTGGTTTGGTGTGTGCTCAAGCTCATCGACAGGAGCTCATTCAAGACCTCTTCAAACAATGGCAAGATCCATCAAAAGGAATGGCAACTGGTGGAATGATCAAGGAGCTTCTTATATCTTTCCGGAGGGCCACTGGGAAGAAGCCAGAGCGCATTATATTTTACAGGGATGGTGTGAGTGAGGGGCAGTTCTATCAAGTTTTACTGTTTGAGCTTGATGCTATACGCAAGGCATGTGCATCCCTGGAGCCTAATTATCAGCCTCCTGTCACATTTGTGGTGGTTCAGAAGCGCCATCATACGAGGCTGTTTGCTAACAACCATCATGACAGGAATTTTGTTGACCGAAGTGGAAACATATTGCCTGGCACTGTTATAGACTCTAAAATTTGTCATCCTACTGAGTTTGACTTCTATCTTTGTAGCCATGCTGGAATCCAGGGAACAAGCCGTCCAGCTCATTACCATGTGCTATGGGATGAGAACAATTTTACAGCCGATGGGCTGCAATCATTGACAAACAACCTTTGTTACACATATGCTAGATGCACTCGTTCTGTTTCAATTGTGCCGCCTGCATATTATGCACATTTGGCTGCCTTCCGAGCTCGATTCTATATGGAACCTGAGACTTCAGAGAGTGGGTCCATGGCCAGTGGGGCTGCCGCAGCACGTGGAGTTGGTGGAGCAGGGCGGAGCACTCGGCCACCGGTTGGTGTTGATGCTGTTAGGCCTCTTCCGGCTCTGAAGGAGAATGTCAAGAGGGTTATGTTCTATTGTTAA 3351 0.4712 MFQKLISRGPHPHPKGHMYRWREKKVTGPFPCYGLLPTCSRRRVSNKEGGHRDRVRKRLSLFAVLIMVRKRRTEAPSGAESSETHESGGTSRGPQHHGERSAPPPQQATGGGGSQGGRGRGPQGGRGGYGGGRGRGMPQQQHGSPPEYQGRGRGGYSQQLGRGHVGGGNGSGSGSGPSYGGPSGPQAPELHQATPLPHPAGVTPTSEASSSSQQFDPSQVEQQMGQMTIHSESVSPAPPSSKSVRFPLRPGKGSYGTKCVVKANHFFAELPNKDLHQYDVTITPEMTSRGVNRAVMDQLVRLYRESHLGRRLPAYDGRKSLYTAGPLPFISKEFKIILLDEDDGSGGPRREREFKVVIKMAARADLHHLGLFLQGRQTDAPQEALQVLDIVLRELPTSRYCPVARSFYSPDLGRRQPLGDGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVTSRPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDASGTMKSVVEYFSETYGFVIQHTQWPCLQVGNAQRPNYLPMEVCKIVEGQRYSKRLNEKQITALLKVTCQRPVERERDIMQTVHHNAYRDDPYAKEFGIKISEKLAQVEARILPAPRLKYHETGREKDCLPQVGQWNMMNKKMVNGGTVNHWICINFSRNVQEGVASGFCYELAQMCYISGMAFNPEPVLPPYSARPDLVDKVLKTRYHDAKARLKKDQQLDLLIVILPDNNGSLYGDLKRICETDLGVVSQCCLTRHVFKMSKQYLANVALKINVKVGGRNAVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKQWQDPSKGMATGGMIKELLISFRRATGKKPERIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNFVDRSGNILPGTVIDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSESGSMASGAAAARGVGGAGRSTRPPVGVDAVRPLPALKENVKRVMFYC 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0537 1116 Gene3D - 812 1116 IPR036397 GO:0003676
Acco01g0537 1116 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 233 1065 - -
Acco01g0537 1116 Pfam Glycine-rich region of argonaut 143 234 IPR024357 -
Acco01g0537 1116 Pfam Piwi domain 744 1063 IPR003165 GO:0003676
Acco01g0537 1116 SUPERFAMILY Ribonuclease H-like 737 1064 IPR012337 -
Acco01g0537 1116 ProSiteProfiles Piwi domain profile. 743 1064 IPR003165 GO:0003676
Acco01g0537 1116 SMART DUF1785_2 401 453 IPR014811 -
Acco01g0537 1116 FunFam Argonaute 10 632 806 - -
Acco01g0537 1116 Pfam PAZ domain 458 584 IPR003100 GO:0005515
Acco01g0537 1116 SMART Piwi_a_2 743 1064 IPR003165 GO:0003676
Acco01g0537 1116 SMART PAZ_2_a_3 458 590 IPR003100 GO:0005515
Acco01g0537 1116 Gene3D - 632 806 - -
Acco01g0537 1116 FunFam Protein argonaute-2 447 573 - -
Acco01g0537 1116 CDD Piwi_ago-like 612 1063 IPR045246 -
Acco01g0537 1116 MobiDBLite consensus disorder prediction 71 248 - -
Acco01g0537 1116 MobiDBLite consensus disorder prediction 203 240 - -
Acco01g0537 1116 SUPERFAMILY PAZ domain 448 608 IPR036085 GO:0005515
Acco01g0537 1116 Gene3D paz domain 447 572 - -
Acco01g0537 1116 Pfam Argonaute linker 2 domain 594 640 IPR032472 -
Acco01g0537 1116 Pfam Mid domain of argonaute 651 726 IPR032473 -
Acco01g0537 1116 FunFam protein argonaute 10-like 812 1116 - -
Acco01g0537 1116 Pfam N-terminal domain of argonaute 257 392 IPR032474 -
Acco01g0537 1116 CDD PAZ_argonaute_like 453 567 - -
Acco01g0537 1116 Pfam Argonaute linker 1 domain 403 452 IPR014811 -
Acco01g0537 1116 ProSiteProfiles PAZ domain profile. 454 568 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0537 Acco-ChrAcco01 6389417 6396990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0537 147 1116 Eukaryotic Initiation Factors Gene Family AT1G48410 80.553 0.0 1594