Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0524 ATGCTAGGGCACCGAACGCGTCTTCTGTCTCTCGCCGCTTTGTCACTTGCTCTCTTCGCTCTACGGGTATTAAATTCTGATTGTTCCAAAATGGCCGATGCCCACGATACTGATAAGAATATTGAGGTGTGGAAGATCAAGAAATTGATCAAAGCCTTGGAGGCTGCTCGAGGAAATGGGACAAGCATGATTTCTCTTATCATGCCTCCACGTGATCAGGTATCTCGTGTCACCAAGATGCTTGGTGATGAGTTTGGAACTGCGTCAAACATAAAAAGCAGAGTGAACCGGCAGTCTGTGCTTGGTGCAATCACTTCTGCTCAGCAGAGGCTTAAGCTGTATAACAGGGTTCCTACAAATGGGCTTGTTCTGTATACTGGAACAATTGTAACAGAAGACGGAAAGGAGAAGAAGGTGACCATTGATTTTGAGCCATTTAGACCTATCAATGCATCTCTCTATCTTTGTGACAACAAGTTTCATACAGAAGCTCTTAATGAGCTTCTGGAATCTGATGACAAGTTTGGTTTTATAGTCATGGATGGAAATGGCACACTTTTTGGGACATTGAGTGGCAATACAAGAGAGGTGCTTCATAAATTTAGTGTGGATCTGCCAAAGAAGCATGGAAGAGGAGGTCAGTCAGCCCTACGATTTGCCCGTCTTAGGATGGAGAAGCGTCATAACTATGTGAGGAAGACTGCAGAGCTTGCTACCCAGTTTTATATTAATCCTGCTACCAGTCAGCCCAATGTTGCAGGTTTAATTCTTGCTGGTTCTGCAGACTTCAAAACTGAGCTTAGCCAGTCAGATATGTTTGATCCTCGACTTCAGGCAAAGATACTTAACGTTGTTGATGTATCCTATGGAGGGGAGAACGGCTTCAATCAGGCTATTGAACTATCATCTGAAATTCTGGCCAATGTAAAGTTCATCCAGGAGAAACGCTTGATTGGAAAATACTTTGAGGAGATTAGTCAGGATACTGGTAAGTATGTTTTTGGGGTTGATGATACTCTTAAAGCACTGGAGATGGGTGCAGTTGAGACACTTATTGTTTGGGAAAGTCTGGATATAAATAGATTTGTCCTGAAACACAGCACTAGTGGTGAAGTTGTTATAAAACACTTCAACAAGGAACAAGAGGCCAACCAGGACAATTTTCGGGATCCTACTAGCAATGCTGAATATGAGGTTCAGGAGAAGATGCCTCTTCTGGAGTGGTTTGCCAATGAGTACAGACGGTTTGGCTGCAGTCTTGAGTTTGTCACTAATAAATCACAAGAGGGCTCACAGTTTTGCAGGGGTTTTGGTGGTATTGGGGGGATTCTGCGTTACCAGCTTGATATGAGGACATTTGACGAATTCTCTGATGATGAAAATGTGTATGATGACTCTGAATAG 1404 0.4316 MLGHRTRLLSLAALSLALFALRVLNSDCSKMADAHDTDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNRVPTNGLVLYTGTIVTEDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVAGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILANVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWESLDINRFVLKHSTSGEVVIKHFNKEQEANQDNFRDPTSNAEYEVQEKMPLLEWFANEYRRFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRTFDEFSDDENVYDDSE 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0524 467 Pfam eRF1 domain 1 48 168 IPR005140 -
Acco01g0524 467 FunFam Eukaryotic peptide chain release factor subunit 1 32 165 - -
Acco01g0524 467 Pfam eRF1 domain 2 174 307 IPR005141 -
Acco01g0524 467 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 33 459 IPR004403 GO:0003747|GO:0006415
Acco01g0524 467 FunFam Eukaryotic peptide chain release factor subunit 1 166 307 - -
Acco01g0524 467 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 36 170 IPR024049 -
Acco01g0524 467 SMART eRF1_1_2 34 170 IPR005140 -
Acco01g0524 467 Pfam eRF1 domain 3 311 448 IPR005142 -
Acco01g0524 467 Gene3D - 309 467 IPR029064 -
Acco01g0524 467 SUPERFAMILY Translational machinery components 172 306 - -
Acco01g0524 467 Gene3D eRF1 domain 2 166 307 IPR042226 -
Acco01g0524 467 SUPERFAMILY L30e-like 308 450 IPR029064 -
Acco01g0524 467 FunFam Peptide chain release factor subunit 1 309 467 - -
Acco01g0524 467 Gene3D eRF1 domain 1 27 165 IPR024049 -
Acco01g0524 467 NCBIfam peptide chain release factor aRF-1 43 447 IPR004403 GO:0003747|GO:0006415
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0524 Acco-ChrAcco01 6290834 6293292 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0524 34 467 Eukaryotic Initiation Factors Gene Family AT1G12920 88.940 0.0 814