Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0499 ATGGATGAGTATCAAGAGATGGAGAGATTTGGTATGGATAATGATTTTGAAGGTGGTGAATGGATCGATGGTGAGTTCTACTACCGAAAGCACAAAGAAAAGCGCACTCAAACCAGAGAAGATGTTCTTTATGGGGTGTTTGCAGACTCTGATGATGACGAAGATGATTATTCTAACAGAAAACGCAGAAAAGATTGTGACTTATCAAAGAAGCCTGACCTCACCAAGCCTGTGAATTTTGTTTCTACTGGAACTTTTATGCCCAATCAAGATGATAACCGTTCTAAAGAACAGGTTGAAGAAAAAAATTATGCTAGTGAGGATAGGCCAGGTTTAGGTCTTGGTATGGGAACTACTAGCACTTCTGGTTCTGGATTAGGTTTTAATACTAGTCATCATGAAAATGCTTCTGATGATGATAATGATGATAACGATTTTTTACCTACGGCATTTGGAAAGAAGATTAAGGAGGCAGCAATGAGAAAGGAGAGGGAACGGGAGAGAGCAAAATTGGAAAAGAAGAGAGCTCAAGGAAAAACTCAAGCTCAAGATGAATTTTCAGATGTTGGGAAGTTTGAGAAACATACAAAGGGGATTGGAATGAGGTTGTTGGAGAAAATGGGATATAAAGGAGGTGGTCTTGGGAAGAATGAACAAGGTATTGTAGCCCCTGTTGAGGCTCACTTGAGGGCTAAGAATACAGGCATTGGATTTAATGACTCAAAGGCAACAATTCCTTTGCCAATTGTACAAGTTGAGAAGACAGCGTTGCCAGGAGTTGCTCAACCTACAGCTGTTAGAGCAAAGGAAAGGTTATGGTCAAAGAAATCAAGGTCAAAGAAGAAGAAAGACAAGGATGATTATATTACTGCTGAGAAATTGCTAGCAAGCAATCAAGAACAGGGTCTAGAGGTTGTTCAAAAGGTTTTTGATATGAGAGGGCCACAGGTTCGAGTAATTACAAATTTATCTGATTTGAATGCTGAGGAGAAGGCTAAGGAAAATGATGTTCCAATGCCAGAGCTTCAGCATAATATGGGGTTAATTGTTAGGTTGGCTGAAGCAGACATCCAAGAGATTGATAGAAATTTGAGGAGAGAGAGAGAGACTGCTCTTAGCTTGAAAAAAGAAAAAGAGAAGTTAGAAACTGAGGTAGCACAGCAAAAAAAGCAGTTGGAAGATTTGGAGGAAATAACAAATGTGCTGGACCAAGTCGGAGAAGAGAGCTTAATGGGGACATTGACGTTGGAGTTGCTTGCACAGTTCTTTGCTGACCTGCGGAAAAGATATGCTGATAGCTACAAGTTGTGTAACTTGTCATGTATTGCTTGCTCATATGCTTTACCTTTGTTTATTAGAGTATTCCAAGGATGGGATCCTCTTCGAAATCCATCACATGGGTTAGAGTTGGTATCAAGGTGGAAAACATTGCTTAAAGAAGAAGATTGCCCTGATATCTGGGATTTAACATCACCTTATACTCAATTGATTTCTGAAGTTGTATTACCTGCTGTCAGGATTTCAGGTATTAACACATGGCAGGCACGGGATCCTGAGCCAATGTTGCGGTTTTTGGAGTCATGGGAAAAATTGCTTCCTTCTTCAGTTCTCACAGCCATGTTGGACAGTATAGTCATGCCTAAATTGGCAAGTGCTGTAGATACATGGGAACCACATCGTGAGACAATTCCTATCCATACTTGGGTGCACCCATGGTTACCTTTGTTAGGACACAAGTTAGAGGGCATGTATCAGATGATACGCTTCAAATTGAGTACCATTCTTGGTGCTTGGCACCCAAGCGATGGCTCTGCTTATGCTATATTGTCTCCTTGGAAAACTGTATTTGATTCAGTGAGTTGGGAACAGCTTATGCTTCGATTTATTGTGCCAAAGTTGCAGCTTGTCTTGCAAGAGTTCCGAGTGAACCCAGCAGATCAGAAGCTTGATCAGTTTTATTGGGTGATGAATTGGGCTTCTGCCATTCCAATTCCTCTGATGGTTGATATAATGGAGAAGTTCTTCTTCACCAAGTGGCTTCAGGTTTTGTATCATTGGTTGTGCTCAAACCCTAACTTTGAAGAAGTTACAAAATGGTACTTGGGCTGGAAAGAACTTATTCCAAAGGAACTTTTGGCTAACGAAAGTATTCGATATCAGCTAAACTGCGGTCTTGATATGATGAACCAGGCTGTTGAAGGTATGGAGGTGGTCCAACCTGGTTTGAAAGAAAATATCAGCTATCTTAGGGTACTCGAGCAAAGGCAGTTTGAGGCTCAGCAAAACGCAGCAGCTCATGCTCAAACCCAGGCTCCTTCAGGCTTTGGGGGTGCTGCCCATATGGATGGTGCAGCTGGTGTACATGAGATGAGCTTAAAGGAAGTCATTGAGGCCCATGCCCAACAACATGGCTTGCTATTCAAGCTGAAACCTGGCAGAATGCACAATGGTCATCAAATCTATGGGTTTGGTAATGTCAACATTATAATTGATTCTTTAAATCAAAAGGTATATGCCCAAACTGAGGATTTATGGTCTTTGGAATCGCTCCAAGGCTTACTGGAGCTGCATAATAAGTCCTTTGGTCGGAGACGATGA 2598 0.4145 MDEYQEMERFGMDNDFEGGEWIDGEFYYRKHKEKRTQTREDVLYGVFADSDDDEDDYSNRKRRKDCDLSKKPDLTKPVNFVSTGTFMPNQDDNRSKEQVEEKNYASEDRPGLGLGMGTTSTSGSGLGFNTSHHENASDDDNDDNDFLPTAFGKKIKEAAMRKERERERAKLEKKRAQGKTQAQDEFSDVGKFEKHTKGIGMRLLEKMGYKGGGLGKNEQGIVAPVEAHLRAKNTGIGFNDSKATIPLPIVQVEKTALPGVAQPTAVRAKERLWSKKSRSKKKKDKDDYITAEKLLASNQEQGLEVVQKVFDMRGPQVRVITNLSDLNAEEKAKENDVPMPELQHNMGLIVRLAEADIQEIDRNLRRERETALSLKKEKEKLETEVAQQKKQLEDLEEITNVLDQVGEESLMGTLTLELLAQFFADLRKRYADSYKLCNLSCIACSYALPLFIRVFQGWDPLRNPSHGLELVSRWKTLLKEEDCPDIWDLTSPYTQLISEVVLPAVRISGINTWQARDPEPMLRFLESWEKLLPSSVLTAMLDSIVMPKLASAVDTWEPHRETIPIHTWVHPWLPLLGHKLEGMYQMIRFKLSTILGAWHPSDGSAYAILSPWKTVFDSVSWEQLMLRFIVPKLQLVLQEFRVNPADQKLDQFYWVMNWASAIPIPLMVDIMEKFFFTKWLQVLYHWLCSNPNFEEVTKWYLGWKELIPKELLANESIRYQLNCGLDMMNQAVEGMEVVQPGLKENISYLRVLEQRQFEAQQNAAAHAQTQAPSGFGGAAHMDGAAGVHEMSLKEVIEAHAQQHGLLFKLKPGRMHNGHQIYGFGNVNIIIDSLNQKVYAQTEDLWSLESLQGLLELHNKSFGRRR 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0499 865 Coils Coil 152 181 - -
Acco01g0499 865 Pfam GC-rich sequence DNA-binding factor-like protein 418 683 IPR022783 -
Acco01g0499 865 MobiDBLite consensus disorder prediction 115 132 - -
Acco01g0499 865 ProSiteProfiles G-patch domain profile. 196 241 IPR000467 GO:0003676
Acco01g0499 865 MobiDBLite consensus disorder prediction 45 145 - -
Acco01g0499 865 MobiDBLite consensus disorder prediction 93 107 - -
Acco01g0499 865 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 1 852 IPR045211 GO:0000390
Acco01g0499 865 Coils Coil 350 398 - -
Acco01g0499 865 MobiDBLite consensus disorder prediction 54 72 - -
Acco01g0499 865 MobiDBLite consensus disorder prediction 161 188 - -
Acco01g0499 865 PIRSF TFIP11 1 860 IPR024933 -
Acco01g0499 865 Pfam Tuftelin interacting protein N terminal 6 104 IPR022159 -
Acco01g0499 865 MobiDBLite consensus disorder prediction 76 92 - -
Acco01g0499 865 Pfam G-patch domain 196 237 IPR000467 GO:0003676
Acco01g0499 865 SMART G-patch_5 194 239 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0499 Acco-ChrAcco01 6050782 6053379 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0499 196 237 C2H2 Transcription Factor Family AT5G26610 50.000 9.18e-08 52.8