Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0475 ATGAACGGATTTCGGAACATTTGTTTTCTTGGAGATCGACTCATTGTGACCCAAGTTAGTAATTTTAGTTTTGGAGAAGCTGAGGGATTGACGGGCGAGATTGAAAAAGAGTCTAAAATTGTTACGGAGATTTTGAGGATCAAAGAGATTCTCTATAAGGAAGAGGTTGATTCAGTGTTGTTTGACTCACTAAGGAGGCTGCAACCGTTGGCACTTACTGTGGACCTTCTTAAGGAAACTGAGATTGGAAAGGTTGTCAATCCTCTCAAGAAGCATGGCTCGAAGGAGATTTGTGAACTGGCACGAACTCTTATTGATGGCTGGAAAGCAATTGTAGATGAATGGATCAACTCGACAAAAGCTATAGAAGCAAAAGGCATCCTAGATTCAATTAATCTATCCTTCCTTAATGGAGGGGAAAGACTTCATTCTCCTCTAAACGAAGTTGCTATGAGATATAGTAAACCGGTTTGCACTAATTCTAGCTCTGCCAAGAAGCAGCGAACAATACGGGTTATAGAGTTGCATGATCTTCAAAAGCAAGGGAACATTGGCCCCCGAAATCCACACTCCAAGCTTTGA 582 0.4141 MNGFRNICFLGDRLIVTQVSNFSFGEAEGLTGEIEKESKIVTEILRIKEILYKEEVDSVLFDSLRRLQPLALTVDLLKETEIGKVVNPLKKHGSKEICELARTLIDGWKAIVDEWINSTKAIEAKGILDSINLSFLNGGERLHSPLNEVAMRYSKPVCTNSSSAKKQRTIRVIELHDLQKQGNIGPRNPHSKL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0475 193 ProSiteProfiles TFIIS N-terminal domain profile. 42 115 IPR017923 -
Acco01g0475 193 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 18 145 IPR044805 -
Acco01g0475 193 Pfam TFIIS helical bundle-like domain 64 112 IPR017923 -
Acco01g0475 193 SMART TFS2_5 41 114 IPR003617 GO:0005634
Acco01g0475 193 CDD TFIIS_I 43 113 - -
Acco01g0475 193 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 40 122 IPR035441 -
Acco01g0475 193 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 32 125 IPR035441 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0475 Acco-ChrAcco01 5853710 5855438 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Acco01g0475 Med26 6.2e-12 No_clan