Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0460 ATGGAGATAGAGGCGAGCAGGGCGGTTGGGAATAATAATCATGGGACGGCGGCGATTCCGGGGCTGAGTCCACTCAGTGAGACGTTGTGGAGGGAGACAAAGGCTAATGTTGATTTTGTCGGAGATGTGTCGGCTAGGCTGACATGGAAAGATCTTACCGTCATGGTTACTCTTGGCAACGGAGAGACCCAGAATGTTCTAGAAGGTCTCACCGGCTACGCCGAGCCCGGAACCTTCACCGCCCTCATGGGCCCCTCCGGCTCCGGCAAGTCCACCCTCCTCGACGCCCTCTCTAGCCGTCTCGCCGCTAATGCCTTCCTCTCTGGATCTATCCTCCTCAATGGTCGCAAAGCCAAGCTCTCTTTCGGAACTGCCGCATATGTGACGCAAGACGACAACCTTATCGGAACTTTGACAGTACGAGAAACGATATCGTACTCGGCGTGTCTGAGGATGCCGGATAAGATGCCAAGCTCGGACAAGCGAGCTTTGGTGGAGAGTACAATAATAGCCATGGGGCTTCAGGATTGTGCCGACACGGTGATCGGAAATTGGCATCTCCGGGGAATCAGTGGCGGAGAGAAGAGAAGAGTTAGTATCGCTTTGGAGATCTTAATGAGGCCCAGGTTGTTGTTTCTTGATGAACCTACCAGTGGTCTCGACAGTGCTTCAGCTTTCTTTGTGACACAAACACTAAGAGCCCTTGCAAGGGATGGTCGAACAGTGATAGCTTCAATTCACCAACCTAGCAGTGAAGTCTTTGAACTCTTTGACCAATTGTACCTTCTTTCTGGCGGCAAAACTGTTTACTTTGGCCAAGCCTCTGAAGCTTACGAGTTCTTTGCACAAGCTGGTTTTCCCTGCCCTGCTTTGAGAAACCCTTCTGATCATTTCCTTAGATGCATCAACTCTGACTTTGACAAAGTCAAGGCCACTCTCAAAGGCTCCATGAAACTCAGGTTTGAAGGAAGTGATGATCCTCTGGACAAGATAACCACAGCTGAAGCTATACGAACTCTCATAGATTATTATCGAACTTCTCAGTACTCTTATGCTGCAACACAGAAAGTGGATGAGATTTCTAAAGTAAAAGGGACAGTGCTGGATTCTGGAGGAAGCCAGGCTAGTTTCTTCATGCAGGCTTTTCAATTAACAAAGCGATCTTTCGTCAACATGTCGAGGGACTTCGGTTACTACTGGCTTCGCCTCGTCATCTATATCGTCGTCACCATCTGCATTGGAACCATCTATTTAAACGTCGGAACCGGCTACAACTCCATTCTGGCGAGAGGTTCGTGTGCATCGTTTGTGTTCGGGTTTGTCACGTTCATGTCGATCGGAGGTTTCCCGTCGTTTGTGGAGGACATGAAGGTGTTTCAGAGGGAGAGGCTCAATGGGCACTACGGAGTGGTGTCGTTTGTGATAAGCAACACATTATCAGCGACGCCGTTTCTGGTACTGATAACGTTTCTGTCAGGAACCATATGTTACTTCATGGTTAGGCTCCACCCAGGCTTCTGGCACTATCTCTTCTTTGTCTTGTGCCTTTATGCAAGTGTCACTGTTGTTGAGAGCTTGATGATGGCCATTGCTAGTGTTGTCCCTAACTTCCTCATGGGTATCATCATTGGCGCTGGCATTCAGGGAATATTCATGTTGGTGTCAGGCTACTTCAGGCTCCCACACGACATACCAAAGCCATTCTGGCGCTACCCAATGTCTTATATCAGTTTCCACTTCTGGGCATTACAGGGCCAATACCAAAATGATCTGAAGGGGTTGATCTTCGACAACAGAACGCCGGAACTTCCAAAGATTCCGGGGGAGTACATACTGGAGAACGTGTTTCAGATCGACGTAAGCAGATCGAAGTGGATCGATTTGATCGTAATCTTCTGCATGATCATCATATATAGGATCATATTCTTCATAATGATCAAGATCAACGAGGATGTGACCCCTTGGATTAGGGGTTACACGGCCAGGAGGAGAATGCAGCAGAAGAGTGCGACACACCAGAACACTACCATTGCTCCTGATGTTCTAACTCAGTCTCCTTCTCTAAGAACCTACGTTACAAGCCAATCCAGTGCTGGTGCTGCTAGGAAAAGGTAA 2115 0.4851 MEIEASRAVGNNNHGTAAIPGLSPLSETLWRETKANVDFVGDVSARLTWKDLTVMVTLGNGETQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSSRLAANAFLSGSILLNGRKAKLSFGTAAYVTQDDNLIGTLTVRETISYSACLRMPDKMPSSDKRALVESTIIAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSGGKTVYFGQASEAYEFFAQAGFPCPALRNPSDHFLRCINSDFDKVKATLKGSMKLRFEGSDDPLDKITTAEAIRTLIDYYRTSQYSYAATQKVDEISKVKGTVLDSGGSQASFFMQAFQLTKRSFVNMSRDFGYYWLRLVIYIVVTICIGTIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVVSFVISNTLSATPFLVLITFLSGTICYFMVRLHPGFWHYLFFVLCLYASVTVVESLMMAIASVVPNFLMGIIIGAGIQGIFMLVSGYFRLPHDIPKPFWRYPMSYISFHFWALQGQYQNDLKGLIFDNRTPELPKIPGEYILENVFQIDVSRSKWIDLIVIFCMIIIYRIIFFIMIKINEDVTPWIRGYTARRRMQQKSATHQNTTIAPDVLTQSPSLRTYVTSQSSAGAARKR 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0460 704 Pfam ABC-2 type transporter 380 586 IPR013525 GO:0016020|GO:0140359
Acco01g0460 704 FunFam ABC transporter G family member 11 41 284 - -
Acco01g0460 704 Gene3D - 41 285 IPR027417 -
Acco01g0460 704 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 47 290 IPR003439 GO:0005524
Acco01g0460 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 284 IPR027417 -
Acco01g0460 704 ProSitePatterns ABC transporters family signature. 190 204 IPR017871 GO:0005524|GO:0016887
Acco01g0460 704 Pfam ABC transporter 69 218 IPR003439 GO:0005524
Acco01g0460 704 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 35 669 - -
Acco01g0460 704 CDD ABCG_EPDR 44 272 - -
Acco01g0460 704 SMART AAA_5 76 247 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0460 Acco-ChrAcco01 5633536 5638358 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0460 77 278 Calmodulin-binding Proteins AT2G36910 31.455 6.72e-12 67.4