Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0427 ATGGACTCTAGCAATTGTCATGTTTCATGTAAAAGGCCAAGCCCTTCTTCTTCTTCAGTTGTTAATGAGCAAGAGCTTAAAGAACAGAAAAAGATAATGGTAGTAAGGTACAAGGAATGCCTCAAGAACCATGCAGCTTCATTAGGTGGACATGCAATTGATGGTTGTGGTGAGTTCATTTCTTCTTCAGAAGTAGAAGAAGTCTCACTTGAAGCTTTCAAGTGCTCAGCCTGCAATTGCCACAGAAACTTCCACAGAAAGGAGATTCAATTCTGTTATAATTCAAACTCTGATGATCAGAATCATCTCTCCCCATTTCTTCCAAACACATCTCAGATCATTGATCTGGATCCTCTTTTATTATCTCCCAACAAAACTGGCTCAAATTTTTCTGATCAGTCACATGATGATCATGGGGAAGAAGAAGATGATAAGAATCAAAATTATAAAGAAGATGAGAAGGTGGTGAAGAAGAGGTTTAGGACTAAGTTCAATGCAGAACAGAAGGAGAAGATGGTGAGATTTGCAGAGAAAGTAGGATGGAAGATGCAGAAAGTTGAAGAATCTGTGGTGGAGCAGTTTTGTGAAGAGATAGGAGTTAAGAGGAGAGTCCTCAGAGTGTGGATGCACAATAACAAGAATACTTATGCCAAAAACTTGTGA 663 0.3891 MDSSNCHVSCKRPSPSSSSVVNEQELKEQKKIMVVRYKECLKNHAASLGGHAIDGCGEFISSSEVEEVSLEAFKCSACNCHRNFHRKEIQFCYNSNSDDQNHLSPFLPNTSQIIDLDPLLLSPNKTGSNFSDQSHDDHGEEEDDKNQNYKEDEKVVKKRFRTKFNAEQKEKMVRFAEKVGWKMQKVEESVVEQFCEEIGVKRRVLRVWMHNNKNTYAKNL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0427 220 MobiDBLite consensus disorder prediction 1 21 - -
Acco01g0427 220 MobiDBLite consensus disorder prediction 125 152 - -
Acco01g0427 220 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 16 215 - -
Acco01g0427 220 Gene3D - 141 218 - -
Acco01g0427 220 FunFam Zinc-finger homeodomain protein 2 144 218 - -
Acco01g0427 220 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 36 89 IPR006456 -
Acco01g0427 220 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 37 88 IPR006456 -
Acco01g0427 220 NCBIfam homeobox domain, ZF-HD class 157 214 IPR006455 -
Acco01g0427 220 Pfam ZF-HD protein dimerisation region 35 89 IPR006456 -
Acco01g0427 220 MobiDBLite consensus disorder prediction 131 152 - -
Acco01g0427 220 SUPERFAMILY Homeodomain-like 153 218 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0427 Acco-ChrAcco01 5151645 5152307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0427 28 218 ZF-HD Transcription Factor Family AT2G02540 44.393 2.82e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Acco01g0427 ZF-HD_dimer 2.4e-27 No_clan