Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0398 ATGGAGGAAAAGGAGAGTTTTGGTTCTGGGCTTGTGCTGAAAGATAACGATGCCCCGGGCGGCTTCCACGTAGCTTCGAGGAATGAAAACTCCGGTCAATTCGCCGGCGGGACTGAAGTGGCGGCTCCGGCACCTGTAAGTGCTCCAGCGACGGTGACGGGGACGGAGACTCCTGGCACGAATGTTAAGAAGAAGAGAGGGAGGCCAAGGAAGTATGCTCCCGATGGCTCAATGGCGTTGGCTTTGTCTCCTATGCCGATCTCATCATCAATTCCGTTGACCGGTGACTTCTCTAGATGGAAGCGAGGCAGAGGGCGGTCTGTTGAATCGATGAAGAAGACGTATAATAAGTATGAATACGAAAGTTCAGAACCAGGTAATGGACTTGCATACTCAGTTGGCGCCAATTTTACACCCCATATACTCACAGTTAATGCTGGCGAGGATGTCAACATGAAGGTTATGTCCTTCTCTCAACAAGGATCCCGTGCTATATGCATTCTTTCTGCAAATGGCATGATTTCAGATGTAGCACTGCGACAACCAACTTCCTCTGGCGGTACTTTAACTTATGAGGGACGATTTGAGATTCTTTCTTTGTCTGGCTCATATATGCCAACTGAGAACGGAGTGACAAGGAGCAGATCTGGTGGAATGAGTGTGTCTTTGGCAGGTCCAGATGGTCGAGTGGTTGGGGGTGGACTTGCTGGTCTGTTGGTTGCTGCAGGCCCTGTGCAGGTTGTTGTGGGCAGTTTCCTTCCAGGTCACCAGCAAGAACACAAGCACAAGAAGCAGAAGATGGAGTATAAATCTACTGTTACGCCTACCCATTTTAGTCCTGTCTCTGATCAAGAAATGCATGTTAGTTTCGGAGGAGTAAGGCCTATTCTAACACCTGCTGCTTTTCAAGGAGACAATGCTGCTTGTTTTAACAATGTTCAAGGCTCAAGGGACTCGTCTACCGATGACTGA 972 0.4897 MEEKESFGSGLVLKDNDAPGGFHVASRNENSGQFAGGTEVAAPAPVSAPATVTGTETPGTNVKKKRGRPRKYAPDGSMALALSPMPISSSIPLTGDFSRWKRGRGRSVESMKKTYNKYEYESSEPGNGLAYSVGANFTPHILTVNAGEDVNMKVMSFSQQGSRAICILSANGMISDVALRQPTSSGGTLTYEGRFEILSLSGSYMPTENGVTRSRSGGMSVSLAGPDGRVVGGGLAGLLVAAGPVQVVVGSFLPGHQQEHKHKKQKMEYKSTVTPTHFSPVSDQEMHVSFGGVRPILTPAAFQGDNAACFNNVQGSRDSSTDD 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0398 323 ProSiteProfiles PPC domain profile profile. 134 275 IPR005175 -
Acco01g0398 323 SUPERFAMILY AF0104/ALDC/Ptd012-like 136 261 - -
Acco01g0398 323 Gene3D - 139 274 - -
Acco01g0398 323 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 41 279 IPR039605 GO:0003680
Acco01g0398 323 Pfam Plants and Prokaryotes Conserved (PCC) domain 139 252 IPR005175 -
Acco01g0398 323 FunFam AT-hook motif nuclear-localized protein 1-like 139 270 - -
Acco01g0398 323 MobiDBLite consensus disorder prediction 1 78 - -
Acco01g0398 323 CDD DUF296 138 252 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0398 Acco-ChrAcco01 4730991 4733772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0398 41 290 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 56.202 3.83e-90 273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g0398 01 4730991 4733772 Acco02g2589 02 24455541 24459278 CCT
Acco01g0398 01 4730991 4733772 Acco02g2589 02 24455541 24459278 ECH
Acco01g0398 01 4730991 4733772 Acco01g0398 01 4730991 4733772 ECH