Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0388 ATGGAAGATGGGTTTGTGCTGTTCTGCTTGCGGAAGCAGAAAAAGAAGCATCTTTTTGTAGCTATGGCGTTTCTCTTTCTCTTTTCTCCATTTGCCTCCTCCATTTGCGAAGAAGGACAAGCATTGATGGAGATTAAAGCTTCCTTCAGCAACATAGCAGATGTTTTGCTTGACTGGGATGACTCGCACAATGATGACTTCTGTTCATGGCGTGGCGTTTACTGTGATAATTTAACCCTTACTGTGCTTACTCTGAATCTGTCAAGTTTGAATCTGGGTGGGGAGATATCACCAGCCATTGGTGACTTGAGAAACTTGCAATCCATTCATCTGCAGGGAAATAAGCTGACTGGTCAGATCCCAGATGAAATTGGGGACTGCGATGCACTCATTCAGCTGGATTTGTCTGATAATCAGCTGAATGGTGACATACCCTTCTCAATATCAAAGCTAAAGCAACTTGAGTTTTTGAATTTGAAGAACAATCAGTTGACAGGTCCGATTCCTTCAACCTTGAGCCAAATGCCAAACCTGAAGACTCTTGATCTTGCTCGTAATCAGCTCACTGGTGAGATACCAAGACTCCTCTATTGGAATGAAGTCTTGCAATACCTAGGGTTGAGAGGAAACATGTTGAGTGGAACTCTATCTCCAGATATATGTCAATTAACTGGACTGTGTGATGTGAGAGGCAACAACTTGACGGGCACAATACCTGAAACCATTGGGAACTGTACAAGCTTTCAAATTCTGGATATATCATATAACCAGGTTACTGGGGAGATCCCCTATAATATTGGGTTTCTGCAAGTGGCTACTTTGTCACTTCAAGGGAATAGACTAACTGGAAGGATTCCAGAAGTGATTGGTTTCATGCAAGCCCTTGCTATTTTGGACTTGAGTGAGAATGAATTGGTGGGGCCTATCCCTCATGTACTTGGCAATTTATCTTTCACTGGCAAGCTATATCTCCATGGGAACAAGCTCACTGGTCCAATACCTCCTGAACTTGGCAATATGTCCAAGCTGAGCTACCTGCAATTAAATGGCAACGAACTAGTTGGCAGAATTCCTGAGGAACTTGGAAAGCTTGAGCATTTGTTTGAATTGAATCTTGCTAACAATTATCTTGAAGGATTTATTCCACATAACATAAGCTCCTGTACTTCCTTGAATAAGTTTAATGTGCACGGTAATCGCTTAAGTGGTTCTATTCCTCTGAGCTTCCACAGCCTTGGGAGTCTGACCTACTTAAATCTCTCAGAAAACAACTTCAAAGGGAATATACCAATTGAGCTGGGCCACATCATAAATCTTGATACACTGGATCTATCTCGCAACAATTTTTCAGGGCAGGTTCCAGCATCTGTTGGTTATCTGGAACATCTTCTGACACTTAACTTGAGCCATAACCATTTTACTGGTCCCTTGCCTGCTGAGTTTGGGAATCTGAAAAGCATCCAGATTATTGATATGTCGTTCAACAATCTATCTGGTAGCATTCCTTCTGAAATTGGGATGCTGCAGAACCTTGTTTCACTGATTATAAACAACAATGACTTGCATGGCAAGATTCCTGACCAGTTAACTAACTGCTTCAGTCTCTCCTCTTTGAATGTCTCTTACAACAACTTGTCTGGAACAATTCCTCCTATGAGGAACTTCTCACGATTTTCATCTGACAGCTTCATTGGAAATCCCATGTTATGTGGAAATTGGTTAGGATCAATATGTGATCCTTACATACCAAAATCCAAGGTAACTTTTTCCAGGGCTGCAGTTGTTTGTCTCACTCTTGGGATCCTCACGTTGTTGGCCATGGTAATAGTTGCTATGTACAGATTGAGCCAATCAATGCAATTGAAGAGAGCTAGAGGAAATGGGCAAGGCATGGGTTCGCCTAAACTTGTTGTTCTTCATATGGATATGGCCATGCACACCTATGATGACATAATGAGAAGTACAGAGAATCTAAGTGAGAAGTATATCATAGGATATGGCGGTTCTAGTACAGTGTACAAGTCTGTCTTAAAGAATTCTCGATCGATAGCGATCAAGCGACTATACAACCAGCATCCTAACAACAAAAGGGGGTTTGAAACAGAACTCGAAACCATTGGCAGCATCAGACATAGAAACCTTGTCACCTTGCATGGTTATGCACTAACTCCAAACGGAAACCTCCTTTTCTATGACTACATGGAGAATGGCTCTCTCTGGGATCTTCTTCATGGCCCCTCAAAGAAGGTAAAACTTGACTGGGAAACACGTTTGAGGATTGCAGTGGGAGCTGCTGAGGGACTCGCTTATCTCCACCATGGCTGCAACCCTAGAATTATTCACAGGGATATCAAGTCTTCAAATATTCTTCTGGATGAGAACTTTGAAGCTCATCTCTCTGACTTTGGCATTGCCAAATGTATGTCAACAACTATGACTCATGCATCAACACATGTTCTTGGGACAATAGGCTATATTGACCCTGACTATGCCCGTACATCTCGCCTGAATGAGAAATCTGATATTTACAGCTTTGGCATAGTTCTACTGGAGCTGCTCACTGGGAAGAAAGCAGTGCACAATGATTCTAACTTGCATCATTTGATACTGTCCAAGACAGATAATGACACTGTAATGGAGGCTGTGGATCCTGAAGTTTCTGTGACCTGCATTAATCAAGCCCATGTGAGGAAGACCTTTCAGCTTGCCCTGCTTTGCACAAAAAGAAATCCATTAGAGAGGCCTACGATGCATGAGGTTGCCAAGGTTTTGGTCTCACTTCTCCCTGCACCTACCAGCAAGACATTTTCCTCAGCTGCAAAGACCATTGACTACGCACGATTTGTGATCGAAAAGGGGCAACAAGGCGGCCCGAAGAAGGAACTGATACAACAACCTCAACAACAGAACAACTCTTGTGGTGCTCAATGGTTCATTCGCTTTGGTGATGCTATATCCAAGAACACCCTCTAA 2973 0.4265 MEDGFVLFCLRKQKKKHLFVAMAFLFLFSPFASSICEEGQALMEIKASFSNIADVLLDWDDSHNDDFCSWRGVYCDNLTLTVLTLNLSSLNLGGEISPAIGDLRNLQSIHLQGNKLTGQIPDEIGDCDALIQLDLSDNQLNGDIPFSISKLKQLEFLNLKNNQLTGPIPSTLSQMPNLKTLDLARNQLTGEIPRLLYWNEVLQYLGLRGNMLSGTLSPDICQLTGLCDVRGNNLTGTIPETIGNCTSFQILDISYNQVTGEIPYNIGFLQVATLSLQGNRLTGRIPEVIGFMQALAILDLSENELVGPIPHVLGNLSFTGKLYLHGNKLTGPIPPELGNMSKLSYLQLNGNELVGRIPEELGKLEHLFELNLANNYLEGFIPHNISSCTSLNKFNVHGNRLSGSIPLSFHSLGSLTYLNLSENNFKGNIPIELGHIINLDTLDLSRNNFSGQVPASVGYLEHLLTLNLSHNHFTGPLPAEFGNLKSIQIIDMSFNNLSGSIPSEIGMLQNLVSLIINNNDLHGKIPDQLTNCFSLSSLNVSYNNLSGTIPPMRNFSRFSSDSFIGNPMLCGNWLGSICDPYIPKSKVTFSRAAVVCLTLGILTLLAMVIVAMYRLSQSMQLKRARGNGQGMGSPKLVVLHMDMAMHTYDDIMRSTENLSEKYIIGYGGSSTVYKSVLKNSRSIAIKRLYNQHPNNKRGFETELETIGSIRHRNLVTLHGYALTPNGNLLFYDYMENGSLWDLLHGPSKKVKLDWETRLRIAVGAAEGLAYLHHGCNPRIIHRDIKSSNILLDENFEAHLSDFGIAKCMSTTMTHASTHVLGTIGYIDPDYARTSRLNEKSDIYSFGIVLLELLTGKKAVHNDSNLHHLILSKTDNDTVMEAVDPEVSVTCINQAHVRKTFQLALLCTKRNPLERPTMHEVAKVLVSLLPAPTSKTFSSAAKTIDYARFVIEKGQQGGPKKELIQQPQQQNNSCGAQWFIRFGDAISKNTL 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0388 990 Pfam Protein kinase domain 661 921 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0388 990 Pfam Leucine Rich Repeat 177 195 IPR001611 GO:0005515
Acco01g0388 990 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 35 199 - -
Acco01g0388 990 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Acco01g0388 990 SUPERFAMILY RNI-like 228 552 - -
Acco01g0388 990 Gene3D Phosphorylase Kinase; domain 1 625 733 - -
Acco01g0388 990 SMART LRR_typ_2 292 320 IPR003591 -
Acco01g0388 990 SMART LRR_typ_2 151 174 IPR003591 -
Acco01g0388 990 SMART LRR_typ_2 364 388 IPR003591 -
Acco01g0388 990 SMART LRR_typ_2 412 436 IPR003591 -
Acco01g0388 990 SMART LRR_typ_2 103 127 IPR003591 -
Acco01g0388 990 SMART LRR_typ_2 508 532 IPR003591 -
Acco01g0388 990 SMART LRR_typ_2 460 483 IPR003591 -
Acco01g0388 990 SMART LRR_typ_2 175 199 IPR003591 -
Acco01g0388 990 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 200 307 - -
Acco01g0388 990 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 308 581 - -
Acco01g0388 990 SUPERFAMILY Protein kinase-like (PK-like) 636 924 IPR011009 -
Acco01g0388 990 Pfam Leucine rich repeat 438 497 IPR001611 GO:0005515
Acco01g0388 990 Pfam Leucine rich repeat 104 164 IPR001611 GO:0005515
Acco01g0388 990 ProSiteProfiles Leucine-rich repeat profile. 177 199 IPR001611 GO:0005515
Acco01g0388 990 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 629 733 - -
Acco01g0388 990 SUPERFAMILY RNI-like 67 311 - -
Acco01g0388 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 779 791 IPR008271 GO:0004672|GO:0006468
Acco01g0388 990 Gene3D Ribonuclease Inhibitor 198 269 IPR032675 -
Acco01g0388 990 Gene3D Transferase(Phosphotransferase) domain 1 734 945 - -
Acco01g0388 990 Gene3D Ribonuclease Inhibitor 270 356 IPR032675 -
Acco01g0388 990 Gene3D Ribonuclease Inhibitor 35 197 IPR032675 -
Acco01g0388 990 Gene3D Ribonuclease Inhibitor 357 455 IPR032675 -
Acco01g0388 990 Gene3D Ribonuclease Inhibitor 456 580 IPR032675 -
Acco01g0388 990 SMART serkin_6 658 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0388 990 ProSitePatterns Protein kinases ATP-binding region signature. 664 686 IPR017441 GO:0005524
Acco01g0388 990 ProSiteProfiles Protein kinase domain profile. 658 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0388 990 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 321 925 - -
Acco01g0388 990 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 734 935 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0388 Acco-ChrAcco01 4630496 4638822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0388 105 990 Receptor kinase-like Gene Family AT5G07180 74.437 0.0 1321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Acco01g0388 Pkinase 4e-42 CL0016