Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0376 ATGGGGAGGTCACCATGTTGTGATAAAGATGGAGTGAGAAAAGGAGCTTGGACTCCTGAAGAAGATGAAATCTTAGTTCAGTACATCAAGAACCATGGCTGTGGAAATTGGCGGACACTACCCAAGAATGCAGGTCTACTTCGATGTGGAAAAAGCTGTCGGCTTCGGTGGATAAACTATCTTCGCCCTGACATCAAACGTGGCCCTTTTACTGATGAAGAAGAAGATAAAATTTTTCAACTTCATGGCATGCTCGGAAACAGATGGGCTGCTATAGCATCTCATTTACCCGGAAGAACAGACAATGAAATTAAGAACTATTGGAACACGCATCTGAAGAAGCGTCTCTGTCAGTCGGGTCATTCTCTGGAGGCGAAAGAGCCTTCTTTTGGTACTCATCAACGTGATGAGAAATATGAATCTTCTTCTGCTGTACGTCATGTGATCCAGTGGGAAAATGCCAGAGTGGAGGCAGAAAAAAGGCTGTCAATGGAATTGGAATCCTCATGTCTCAATCATTGTTCCAAAACTAACACACATTCTGATTGCTTTCTTCGACTTTGGCACTCCGAGGTAGGACAATCATTTCGCATGATCACGGTAAAGAAAGAAGAAAGTGACAGCCCCACTTCACAAGTAAGCAGTATCTTTGCCAGCATGGCTCAAGAACAAGCAAGCAGCTGCAATCCAAAGGTTGAAGAAGGCACGGCAGGGTCAGACTCAGGTTCTCATGAATTTCTTGATGCCTCTGACTCTGCATTAAAGCTCCTGCTAGATATGCCTGATGGTAATGTAGGATTCTTTGAAGGATTGGAACTGAATGAGAATTTCCAGAGTCCTCTGCATGATAAATATGACTGA 861 0.4379 MGRSPCCDKDGVRKGAWTPEEDEILVQYIKNHGCGNWRTLPKNAGLLRCGKSCRLRWINYLRPDIKRGPFTDEEEDKIFQLHGMLGNRWAAIASHLPGRTDNEIKNYWNTHLKKRLCQSGHSLEAKEPSFGTHQRDEKYESSSAVRHVIQWENARVEAEKRLSMELESSCLNHCSKTNTHSDCFLRLWHSEVGQSFRMITVKKEESDSPTSQVSSIFASMAQEQASSCNPKVEEGTAGSDSGSHEFLDASDSALKLLLDMPDGNVGFFEGLELNENFQSPLHDKYD 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0376 286 CDD SANT 69 112 IPR001005 -
Acco01g0376 286 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Acco01g0376 286 CDD SANT 16 61 IPR001005 -
Acco01g0376 286 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Acco01g0376 286 Gene3D - 14 66 - -
Acco01g0376 286 MobiDBLite consensus disorder prediction 224 244 - -
Acco01g0376 286 FunFam Myb transcription factor 11 67 - -
Acco01g0376 286 SMART sant 13 63 IPR001005 -
Acco01g0376 286 SMART sant 66 114 IPR001005 -
Acco01g0376 286 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 216 - -
Acco01g0376 286 FunFam MYB transcription factor 68 128 - -
Acco01g0376 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Acco01g0376 286 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Acco01g0376 286 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Acco01g0376 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Acco01g0376 286 Gene3D - 69 143 - -
Acco01g0376 286 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0376 Acco-ChrAcco01 4511323 4516002 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0376 1 269 MYB Transcription Factor Family AT3G61250 53.047 1.82e-93 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco01g0376 Myb_DNA-binding 1.7e-15 CL0123