Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0374 ATGGGGAGGCAGCCAACTGATAAGGCAAAACCTAAACACAGGAAAGGGTTATGGTCACCTGAAGAAGACAATAAGCTCAGAAACTATATCGTCAAGCATGGCCATGGCTGCTGGAGCTCTGTTCCAATCAATGCAGGCTTGCAGAGGAATGGCAAGAGTTGCAGATTGAGGTGGATCAACTATCTAAGGCCAGGATTGAAGAGAGGAATGTTCAGCAAACAAGAGGAGGAGACAATCTTGACCCTTCATCACATGCTAGGCAACAAGTGGTCTCAGATGGCACAGCATTTACCAGGAAGGACAGATAATGAGATAAAGAACCACTGGCATTCATATTTGAAAAAGAAAGTGGCCAAGCCCAAGGCAGAGGAAATACAATCTCATAATAATTATAAACAAATGCAGTACGCTAGCTCAAGCTCAGATACCTTTGATTCTTCTTCTTCATCAAGTCAAAAACCAGCAATTCCAATCTCTGATCACTTCTCTTGTTTACAAAACTATAACTTCATCAAAGAGGCTGGTCAGAGCTCCTTACCAAAACTTCTATTTGCTGAGTGGCTTTCATTAGATCAAACGAACAGTGGGATCCCTGCAAATTCAGATGATGACCCTTTTGTGTTCGGAAATGGAAGTTTTGATCAATACTCGGATTTCCATGAAGCCGTGATACATGGTGTGTTAGAAGGGGGAAGTTACGGTGGGGAGTTTGATAATGGTCTAACAACCCCAAATGCTGCAGCAGCTACTGAAGACTTCAATGCACAGTTCAAGATAGCAAATCAAATGGCAGGAAATGGAGTCATCCATTTCCCAAGTTTCAGCATGAACAATGATGTAATGTACGTATAG 852 0.4237 MGRQPTDKAKPKHRKGLWSPEEDNKLRNYIVKHGHGCWSSVPINAGLQRNGKSCRLRWINYLRPGLKRGMFSKQEEETILTLHHMLGNKWSQMAQHLPGRTDNEIKNHWHSYLKKKVAKPKAEEIQSHNNYKQMQYASSSSDTFDSSSSSSQKPAIPISDHFSCLQNYNFIKEAGQSSLPKLLFAEWLSLDQTNSGIPANSDDDPFVFGNGSFDQYSDFHEAVIHGVLEGGSYGGEFDNGLTTPNAAAATEDFNAQFKIANQMAGNGVIHFPSFSMNNDVMYV 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0374 283 CDD SANT 71 113 IPR001005 -
Acco01g0374 283 CDD SANT 18 62 IPR001005 -
Acco01g0374 283 Gene3D - 15 67 - -
Acco01g0374 283 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Acco01g0374 283 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Acco01g0374 283 FunFam MYB transcription factor 70 146 - -
Acco01g0374 283 SMART sant 67 115 IPR001005 -
Acco01g0374 283 SMART sant 14 64 IPR001005 -
Acco01g0374 283 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 66 IPR017930 -
Acco01g0374 283 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Acco01g0374 283 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Acco01g0374 283 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Acco01g0374 283 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Acco01g0374 283 FunFam MYB transcription factor 12 68 - -
Acco01g0374 283 PANTHER MYB DOMAIN PROTEIN 55 1 169 - -
Acco01g0374 283 Gene3D - 70 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0374 Acco-ChrAcco01 4499814 4502006 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0374 8 128 MYB Transcription Factor Family AT3G48920 67.769 1.66e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco01g0374 Myb_DNA-binding 3.3e-12 CL0123