Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0371 ATGGGTGTGAAGCATTTGTGGGATATACTCGAATCCTGCAAGAAAACAGTTCCACTTCACCATCTCCAGAACAAGAGTATATGCATAGATCTCTCATGTTGGATAGTTCAACTTCATAATGTGGGCAAATCAATCCCATGTGTGAAGGAGAAAGTCTACCTCAGGGGTCTCTTTCACCGCATTAGAGCGCTTATTGCTTTGAATTGCAGCCTAATTTTTGTTACAGATGGATCAATTCCTGCTATTAAATTATCAACTTATAGGCAACGTTTAAACTCTGGAAAAGATGTAGCACAAAATGAAAGCAACTTACATAAAATGTCCTCTTTACCGAGGAACATGGGATCTGAGTTTTCATGCATGATAAAAGAGGCTTGCAACTTGGGAATGGCTCTTGGCATCCCTTGCCTGAATGGGATTGAAGAAGGTGAAGCTCAGTGTGCTTTGTTGAACTCCGAGTTATTGTGTGATGGATGTTTCAGTTCAGATTCAGATATCTTTCTTTTTGGTGCAAGGACAGTGTATAGGGATATCTGCCTTGGAGATGGCGGATATGTTGTTTGCTATGAGATGGAAGACATTGAAAGAAAACTTGGATTTGGAAAGGACTCATTGATTGCTCTTGCCGTACTTCTTGGGAGTGATTATAGTCAAGGAGTTTACGGTCTGGGTCCGGAGTCAGCTTGTCAGATAGTTAGATCGATTGGTGACAAATGTGTGCTGCAAAAATTTGCTTCTGAAGGAATTGAATGTCTGAAAAGACCAAAAGGTGCAAAGAAGCTGGGGCAAGTTTTCAAGAACAACAACAAAGAAAATATGTTGGACCATGATATGGCATTGAATCAGGGAGGTGAGAACAATTCACAAAGAGATTATAACTTGCAAGTTATCAATGCTTATGTGAAGCCGAAATGCCACCCAGCTGACTCTGATATTGTGATGAGGGTTCTTGCTCAGTATCCATTTCAACGTAGTAGACTCCAGCAGATGTGTTATGAATTTTTTCAGTGGCCTCCGGAGAAAACAGATGAGTATATCCTTCCAAAGATAGCTGAAAGGGATTTACGACGATTTGCCAATTTGCGCTTAACTTCATCAGAATTAGGTGCAAATCTTCCATTGAATGAGATCCCTGTAAAGTGTCCTATCTCGGAGATCATTAAGTGCCGAAAAGTTCAAGGAAGAGAATGCTATGAGGTGTCATGGAATGAAATGGATGGACTTGGAACTTCAATAGTACCGGCAGATCTTTTAAAAAGTGCTTGTCATGAGAAGATTTTAGAGTTTGAAGAGAAAAAAGGTCGGCTTAAGAAGCAAAATGCCCAAAAGAGAAGGCCTAAGAAAACTGAAACTGTATCGTCTTCTATGGCTGAACTTGACCTGAAACTCACGAATCTGTCACTGGATATCAATCTGGGAGACCATGCAAATCACAATGCCTCTGATTCATCAGAACAGGTATTTCAAGATGCAGCTGCCGTGGATGAAGCTCATTTGAATAACAGAGACTTGGCGTGTTCATCACATGATGAACCGATTGATTGGAATCAGAAGGGTGATTCCATGTCTAAAGATGAAGTGATTGATTTATTGAGTCCTTCCCCACCTAAGCAGCTGTATGCTTCCTCCAAGTGTCAACAGACTAATGGTGATCTTATCAAGGTGATAAATTTGAGTGATTCAGACAGTGACACATCACCGGAACATAAGAGGAAAGCACAGGAGCTGAGAATGTTCTTAGCAGGAATAAGGAATGACCTCCATTGA 1767 0.408 MGVKHLWDILESCKKTVPLHHLQNKSICIDLSCWIVQLHNVGKSIPCVKEKVYLRGLFHRIRALIALNCSLIFVTDGSIPAIKLSTYRQRLNSGKDVAQNESNLHKMSSLPRNMGSEFSCMIKEACNLGMALGIPCLNGIEEGEAQCALLNSELLCDGCFSSDSDIFLFGARTVYRDICLGDGGYVVCYEMEDIERKLGFGKDSLIALAVLLGSDYSQGVYGLGPESACQIVRSIGDKCVLQKFASEGIECLKRPKGAKKLGQVFKNNNKENMLDHDMALNQGGENNSQRDYNLQVINAYVKPKCHPADSDIVMRVLAQYPFQRSRLQQMCYEFFQWPPEKTDEYILPKIAERDLRRFANLRLTSSELGANLPLNEIPVKCPISEIIKCRKVQGRECYEVSWNEMDGLGTSIVPADLLKSACHEKILEFEEKKGRLKKQNAQKRRPKKTETVSSSMAELDLKLTNLSLDINLGDHANHNASDSSEQVFQDAAAVDEAHLNNRDLACSSHDEPIDWNQKGDSMSKDEVIDLLSPSPPKQLYASSKCQQTNGDLIKVINLSDSDSDTSPEHKRKAQELRMFLAGIRNDLH 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0371 588 Gene3D - 2 199 - -
Acco01g0371 588 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 201 361 IPR036279 -
Acco01g0371 588 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 557 IPR006084 -
Acco01g0371 588 FunFam Flap endonuclease GEN-like 1 200 257 - -
Acco01g0371 588 Gene3D - 201 267 - -
Acco01g0371 588 SMART xpgineu 130 200 IPR006086 GO:0004518
Acco01g0371 588 MobiDBLite consensus disorder prediction 435 455 - -
Acco01g0371 588 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 24 38 IPR006084 -
Acco01g0371 588 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 71 90 IPR006084 -
Acco01g0371 588 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 129 146 IPR006084 -
Acco01g0371 588 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 205 220 IPR006084 -
Acco01g0371 588 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 150 170 IPR006084 -
Acco01g0371 588 CDD PIN_GEN1 2 198 - -
Acco01g0371 588 SMART xpgn3 1 97 IPR006085 GO:0004518
Acco01g0371 588 FunFam flap endonuclease GEN-like 2 2 199 - -
Acco01g0371 588 Pfam XPG N-terminal domain 1 91 IPR006085 GO:0004518
Acco01g0371 588 CDD H3TH_XPG-like 203 246 - -
Acco01g0371 588 SUPERFAMILY Chromo domain-like 383 435 IPR016197 -
Acco01g0371 588 Pfam XPG I-region 133 215 IPR006086 GO:0004518
Acco01g0371 588 SUPERFAMILY PIN domain-like 2 215 IPR029060 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0371 Acco-ChrAcco01 4462288 4468058 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0371 1 236 Core DNA Replication Machinery Family AT5G26680 26.357 3.12e-13 70.1