Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0364 ATGTCTCCGGCGGCACCGTCAGCTACTGCACCCTCGCCGTCGTCGATGACTCCCGAGGTCGACATCTCGACTCTTCTCAAGGCCACAGCCGTCGTATGCGTTGTCCTCTTCATCACCTTCTTTTCGGCATACTTCAATTACTGGACCGCCGTAATTTTCGCCAGACAGCACAATTTGGCCGCCGGCGGTCGTGATGGCGTAAGTTGGCGGTGTTCTTGCACTCGAGGAATCGACCGGAAAGTCCTGGACACTTTCCCGATCCTCGTGTATTCCACGATCAAAAACCAAAAAATTGGAAAAGGAGAGCTCGAATGCTCAGTGTGCTTGAGCGAATTCGAAGACCACGAGACTCTCCGGTTGATACCAAAATGCAACCACGTGTTTCACCCGGATTGTATCAACGCCTGGTTAGCTACTCATGATACTTGCCCCCTTTGTCGCGCAAATCTGAATCCAGATCCCGGCGAAGTCGCCATCAGAATGCCTAGTCAGTTGAACGCTGATGAACAGACCGAAGAAAGTGGAGGCAGAAGCATGAGGAGTGAAGTGAGTGAAAGACAGAACCACCCAGCAGCAGCGCAGGTGCCAAACGACGTCGGTGCGAGCAGCAGCAACTCAGCAAACAACAAGGAGGAAGAGTGCAGATCTAAGCCAAGTCGGAATCGGAGAACGAGAAGGAGAAAGTATGAGAGGCTTCAAAGATCCAACTCGACGGGACATTCACTGGTTGAACAGCCTGAAGCGACGCCGTCGAGTGATCATGAGAGGTATACGCTACGGTTGACGGAGGAGCTGCGGAGGTATCTTCTGATGAATCATGCGGCCATCGGGCGATCGGAGAGCTACCATGGGGTGACGCCGATGAAAGGGATGGGTTGGAGTGACAGTGATGAAAAAAGCAGAGGGAAGGTTAACATGATGACGACGCCTCCATTTGTTCGTGGCAAGGATTGA 954 0.5273 MSPAAPSATAPSPSSMTPEVDISTLLKATAVVCVVLFITFFSAYFNYWTAVIFARQHNLAAGGRDGVSWRCSCTRGIDRKVLDTFPILVYSTIKNQKIGKGELECSVCLSEFEDHETLRLIPKCNHVFHPDCINAWLATHDTCPLCRANLNPDPGEVAIRMPSQLNADEQTEESGGRSMRSEVSERQNHPAAAQVPNDVGASSSNSANNKEEECRSKPSRNRRTRRRKYERLQRSNSTGHSLVEQPEATPSSDHERYTLRLTEELRRYLLMNHAAIGRSESYHGVTPMKGMGWSDSDEKSRGKVNMMTTPPFVRGKD 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0364 317 MobiDBLite consensus disorder prediction 293 317 - -
Acco01g0364 317 CDD RING-H2_EL5-like 104 147 - -
Acco01g0364 317 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 155 IPR013083 -
Acco01g0364 317 Pfam Ring finger domain 104 147 IPR001841 -
Acco01g0364 317 MobiDBLite consensus disorder prediction 185 209 - -
Acco01g0364 317 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 9 225 - -
Acco01g0364 317 SMART ring_2 105 146 IPR001841 -
Acco01g0364 317 FunFam E3 ubiquitin-protein ligase ATL6 67 153 - -
Acco01g0364 317 MobiDBLite consensus disorder prediction 162 255 - -
Acco01g0364 317 SUPERFAMILY RING/U-box 94 156 - -
Acco01g0364 317 ProSiteProfiles Zinc finger RING-type profile. 105 147 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0364 Acco-ChrAcco01 4368429 4369528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0364 1 272 Rapid Response to Elicitors AT3G05200 37.500 5.10e-49 166