Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0359 ATGGCTTTATCTTTAAGTTTTCTTCTTCTTCATTTCCTTTTCGTGTTCCATCTCTCCCTTTTCCTTGCTTTTGCTTTCACGCACCAGGCTGATGAGAGTTCTGAGAAAAATCATCTTCTTTCTTTCAAAACCAGTCTCCATAACCCCCACCTTCTTGCTTCATGGAACTCCTCAACCCCTCATTGCAACTGGGTTGGCGTTAGTTGTGAACTCGATCGAGTTACCTCACTTTCTCTTCCCACTTTGCACCTCGAAGGCCCACTGCCTTCGTCTCTCTTCTCCCTTACTGGCCTTACCGTCCTCAACTTATTCTCCAACGCTCTCTCTGGTGATATTCCACCACAGATAGCTAATCTGAGAAACTTGAGGGAGCTCAATCTTAGTTATAATCAGTTTTCCGGCGATATTCCAGATGAGTTCAGCGGTTTGACTCAGCTTACAACTCTCGCACTCGGCTCCAACTGTTTTACCGGAAAAATCCCGCCGGAGCTGGGGTTCCTGTCACAGCTCCGTGTCCTCGACCTCTCTGGTAATGGCCTCACTGGAACGATACCGGAAAGCTTCGGAAACCTGAGTCAGCTTCAGTTCCTTGACCTCAGCAACAATCTTCTCTCAGGTTCTCTACCCTTGTCTATTTTCACGGGAACTCTGTCTTTGATTTCCGTTGACGTTTCAAACAATTCGTTTTCTGGTTCTCTGCCACCGGAAATCCGTAACTGGAGGAATATCACTGCCCTTTACATTGCCTCTTTTAAATTTACGGGTAGGTTGCCTCCTGAGGTTGGCGAGCTTTCGCGGCTTCAAGTGCTTTATGCACCTTCTAGTTCTATAGAAGGTCCATTGCCTGAAGAAATGTCGAAACTGAAGTCATTGTCTAATCTTGACCTTTCTTACAACCCCTTGAAGTGTTCGATACCGAAGTTTATTGGGAAACTTCAGAATTTGAAATTGCTCGACCTTTCTTTTGCTCAGCTTACAGGCTCCATTCCGTCTGAGCTTGGAAGTTGTAGAAACTTAAGTTCTGTGATGCTTTCTTTCAACTCGCTTTCTGGGTCATTGCCAGAGGAGCTTTCCGATCTTCCAATGGTGTCATTCATAGCTGAAAGGAACCAGTTTCATGGACCTTTGCCTGCTTGGCTCGGAAAGTGGAATCAGATTGATACTCTTTTGCTCTCGCAGAATAGATTTTCTGGTAACATTCCTCCTGAGCTTGGGAATTGCTCTTCATTGGAGCACCTCAGTTTGAGAAGTAACTTGCTGACAGGTCCCATTCCTGAGGAGCTATGTAATGCCGCTTCACTTATGGAGATTGACGTTGATGATAACTACCTTACTGGCACAATTGAGAAAGCATTTGTTAGGTGTAAGAACCTTGTCCAATTAGAATTGATGAAAAATCAGATCACTGGTTCCATCCCACAGTACCTTTCAGAGCTTCCTTTGATGGTGCTTGACCTTGACTCAAACAATTTTAGTGGAAGCATACCTACAAGTCTGTGGAATTCACCAACTCTAATGGAGTTTTCTGCTGCAAATAACCGTCTGCAGGGCTCTCTTCCTGCGGAGATTGGGAATGCAGTTCTTCTAGCCAGGCTTGTCCTTAATAACAATCAACTGACGGGTATTATACCCAAGGAAATTGGAAATCTCACGGGTCTGTCTGTTATTAATTTGAATGGAAATCTTTTTGAAGGGAACATCCCATCAGAGCTAGGAGATTGCATTTCACTTACAACCTTGGACCTTGGAAATAACCAACTAAATGGATCTATTCCAGATGAACTGGTGGAACTGAGCCAATTACAGTGTCTAGTTCTGTCCCATAATAATCTTTCTGGGTCTATTCCTGCAAAACAATCTTCATATTTTAGCAGAGTTGCCATCCCTGATTTGAGCTTTGTTCAGCACCTTGGAGTATTTGATCTGTCCCATAACAAATTGTCTGGGATTATACCTGATGAACTGGGGAGGTGTGTGGTCGTTGTGGATCTTTTGCTCAGCAACAACATCCTTTCTGGGAGTATCCCAAGCTCACTCTCTCGCCTGACAAATCTTACAACTCTAGATTTATCTGGTAACGTCTTGTCAGGTTCCATTCCACCAGAACTTGGAGATTCCCTCAAGCTACAAGGATTATATCTGGGGCATAATGAGCTTAATGGTACCATCCCTGAAAGTTTTGGTAAAATGAGCAGTTTGGTGAAGCTGAATTTGACAGGAAATAAGTTGTCTGGTTCGATTCCAATTAGCTGCGGGAACTTGAAGGAGCTTACTCACTTAGATTTGAGCTCTAATGAGCTTAGTGGCCAGCTTCCATATTCTCTATCAGGTCTTCAAAGCCTTGTTGGTCTTTATGTGCAGGAGAACAAGCTTTCTGGGCAAATAGATATGCTCTTCTCCAATACCATGACATGGAGGATTGAGACAATGAATTTGAGCGTCAATTGCTTCAGTGGGGATTTGCCAAGTTCTTTGGGAAACCTTTCGTTCTTGACAAATTTGGATGTTCATGGAAATATGTTCGTGGGAGGGATTCCATTGGAACTTGGGAATCTAGTGCAGCTGGAGTACGTCGATGTTTCTGGGAACAGGTTATATGGAAAGATTCCTGAGAAAATTTGCAGCCTAGTTAATCTGAACTACCTTGATTTGTCTCAGAACAGATTGGAAGGGCCTATACCCAGAAGCGGTATTTGCAAGAACCTATCAAGAGTTAGAATTACAGGAAACAAAAATCTCTGTGGGCGGATTTTGGGCGTTAATTGCCCAATCAAAAGCATTGGTAGATTTTCCTTGTCTAATGCGTGGCAACTTGCTGCGATTGCCATTACAATCACACTGATGACTCTGAGCGTTGCATTTGTTCTACACAGATGGATTGGCAGGAAGCAAAATGATCCGGAAGACCTTGAGGAACGCAAGCTAAACAACTATGTGGATCAAAATCTTTATTTCTTGACCAGTAGCAGATCAAAGGAACCTCTAAGCATAAATGTTGCAATGTTTGAGCAGCCTCTTCTAAAACTAACCTTGGAGGATATCCTTGAAGCTACTGGCAACTTCAGCAAGACTAACATAATTGGAGATGGAGGTTTTGGGACTGTATATAAAGCTACTTTGCTCAATGGCAAAACAGTTGCAGTAAAGAAGCTGAGTGAAGCTAAAACGCAGGGCCATCGCGAGTTCATGGCTGAAATGGAAACTTTGGGCAAGGTGAAACATCAGAATCTTGTTCCACTTCTTGGCTATTGCTCCTTGGGTGATGAAAAACTCCTTGTTTACGAATACATGGTGAATGGAAGCTTAGATCTATGGTTGAGAAACAGGACTGGTGGAGCCCTTGAAGTCCTTGACTGGAACAAAAGGTACAAAATTGCAACTGGTGCAGCCAGAGGATTAGCTTTCCTTCATCACGGGTTCATCCCCCACATCATTCACAGAGACATTAAAGCAAGCAACATATTGCTAAATAAAGATTTTGAGCCTAAAGTTGCAGACTTTGGACTTGCTAGGCTTATCAGTGCCTGTGAGTCACACATCAGCACTGACATTGCGGGAACATTTGGGTACATTCCGCCGGAGTATGGACAGAGTGGGAGGTCCACAACAAGAGGAGATGTCTATAGTTTTGGGGTCATTATGCTTGAACTAGTGACCGGAAAAGAACCGACAGGGCCTAATTTTAAAGACATTGAAGGTGGGAATCTGGTGGGGTGGGTACTTCTGAAGATCAAGAAGGGACAGGCTGCTGATGTTCTTGATCCAAAGGTTCTGGATGCCGATTCGAAGCCGATGATGCTTCGGGTGCTGCAGATTGCTTGTGCGTGCCTCTCTGATAATCCTGCAAACAGGCCTACCATGCTTCAGGTGCTCAAGCTTTTGAAGGGGATCAAAGGAGAGTAG 3903 0.4394 MALSLSFLLLHFLFVFHLSLFLAFAFTHQADESSEKNHLLSFKTSLHNPHLLASWNSSTPHCNWVGVSCELDRVTSLSLPTLHLEGPLPSSLFSLTGLTVLNLFSNALSGDIPPQIANLRNLRELNLSYNQFSGDIPDEFSGLTQLTTLALGSNCFTGKIPPELGFLSQLRVLDLSGNGLTGTIPESFGNLSQLQFLDLSNNLLSGSLPLSIFTGTLSLISVDVSNNSFSGSLPPEIRNWRNITALYIASFKFTGRLPPEVGELSRLQVLYAPSSSIEGPLPEEMSKLKSLSNLDLSYNPLKCSIPKFIGKLQNLKLLDLSFAQLTGSIPSELGSCRNLSSVMLSFNSLSGSLPEELSDLPMVSFIAERNQFHGPLPAWLGKWNQIDTLLLSQNRFSGNIPPELGNCSSLEHLSLRSNLLTGPIPEELCNAASLMEIDVDDNYLTGTIEKAFVRCKNLVQLELMKNQITGSIPQYLSELPLMVLDLDSNNFSGSIPTSLWNSPTLMEFSAANNRLQGSLPAEIGNAVLLARLVLNNNQLTGIIPKEIGNLTGLSVINLNGNLFEGNIPSELGDCISLTTLDLGNNQLNGSIPDELVELSQLQCLVLSHNNLSGSIPAKQSSYFSRVAIPDLSFVQHLGVFDLSHNKLSGIIPDELGRCVVVVDLLLSNNILSGSIPSSLSRLTNLTTLDLSGNVLSGSIPPELGDSLKLQGLYLGHNELNGTIPESFGKMSSLVKLNLTGNKLSGSIPISCGNLKELTHLDLSSNELSGQLPYSLSGLQSLVGLYVQENKLSGQIDMLFSNTMTWRIETMNLSVNCFSGDLPSSLGNLSFLTNLDVHGNMFVGGIPLELGNLVQLEYVDVSGNRLYGKIPEKICSLVNLNYLDLSQNRLEGPIPRSGICKNLSRVRITGNKNLCGRILGVNCPIKSIGRFSLSNAWQLAAIAITITLMTLSVAFVLHRWIGRKQNDPEDLEERKLNNYVDQNLYFLTSSRSKEPLSINVAMFEQPLLKLTLEDILEATGNFSKTNIIGDGGFGTVYKATLLNGKTVAVKKLSEAKTQGHREFMAEMETLGKVKHQNLVPLLGYCSLGDEKLLVYEYMVNGSLDLWLRNRTGGALEVLDWNKRYKIATGAARGLAFLHHGFIPHIIHRDIKASNILLNKDFEPKVADFGLARLISACESHISTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVIMLELVTGKEPTGPNFKDIEGGNLVGWVLLKIKKGQAADVLDPKVLDADSKPMMLRVLQIACACLSDNPANRPTMLQVLKLLKGIKGE 1300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0359 1300 ProSitePatterns Protein kinases ATP-binding region signature. 1027 1050 IPR017441 GO:0005524
Acco01g0359 1300 Gene3D Ribonuclease Inhibitor 142 216 IPR032675 -
Acco01g0359 1300 FunFam LRR receptor-like serine/threonine-protein kinase 141 215 - -
Acco01g0359 1300 FunFam serine/threonine-protein kinase BRI1-like 2 982 1096 - -
Acco01g0359 1300 ProSiteProfiles Protein kinase domain profile. 1021 1300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0359 1300 Gene3D Ribonuclease Inhibitor 366 622 IPR032675 -
Acco01g0359 1300 Gene3D Ribonuclease Inhibitor 623 925 IPR032675 -
Acco01g0359 1300 Gene3D Ribonuclease Inhibitor 217 365 IPR032675 -
Acco01g0359 1300 Pfam Protein tyrosine and serine/threonine kinase 1024 1293 IPR001245 GO:0004672|GO:0006468
Acco01g0359 1300 SUPERFAMILY L domain-like 632 915 - -
Acco01g0359 1300 Pfam Leucine Rich repeat 683 697 IPR001611 GO:0005515
Acco01g0359 1300 SMART serkin_6 1021 1294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g0359 1300 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 630 926 - -
Acco01g0359 1300 Gene3D Transferase(Phosphotransferase) domain 1 1097 1300 - -
Acco01g0359 1300 SMART LRR_sd22_2 754 780 - -
Acco01g0359 1300 SMART LRR_sd22_2 876 904 - -
Acco01g0359 1300 SMART LRR_sd22_2 288 317 - -
Acco01g0359 1300 SMART LRR_sd22_2 167 193 - -
Acco01g0359 1300 SMART LRR_sd22_2 455 478 - -
Acco01g0359 1300 SMART LRR_sd22_2 634 655 - -
Acco01g0359 1300 SMART LRR_sd22_2 682 714 - -
Acco01g0359 1300 SMART LRR_typ_2 191 215 IPR003591 -
Acco01g0359 1300 SMART LRR_typ_2 682 706 IPR003591 -
Acco01g0359 1300 SMART LRR_typ_2 852 876 IPR003591 -
Acco01g0359 1300 SMART LRR_typ_2 730 753 IPR003591 -
Acco01g0359 1300 SMART LRR_typ_2 634 658 IPR003591 -
Acco01g0359 1300 SMART LRR_typ_2 95 118 IPR003591 -
Acco01g0359 1300 SMART LRR_typ_2 119 142 IPR003591 -
Acco01g0359 1300 SMART LRR_typ_2 754 777 IPR003591 -
Acco01g0359 1300 SMART LRR_typ_2 167 190 IPR003591 -
Acco01g0359 1300 SMART LRR_typ_2 407 431 IPR003591 -
Acco01g0359 1300 SMART LRR_typ_2 550 574 IPR003591 -
Acco01g0359 1300 SMART LRR_typ_2 598 622 IPR003591 -
Acco01g0359 1300 SMART LRR_typ_2 312 336 IPR003591 -
Acco01g0359 1300 SUPERFAMILY Protein kinase-like (PK-like) 1002 1294 IPR011009 -
Acco01g0359 1300 FunFam Leucine-rich repeat receptor-like kinase 34 140 - -
Acco01g0359 1300 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1144 1156 IPR008271 GO:0004672|GO:0006468
Acco01g0359 1300 SUPERFAMILY L domain-like 49 363 - -
Acco01g0359 1300 Pfam Leucine rich repeat 732 791 IPR001611 GO:0005515
Acco01g0359 1300 Pfam Leucine rich repeat 145 204 IPR001611 GO:0005515
Acco01g0359 1300 Pfam Leucine Rich repeats (2 copies) 96 137 IPR025875 -
Acco01g0359 1300 FunFam leucine-rich repeat receptor protein kinase EMS1 216 363 - -
Acco01g0359 1300 Gene3D Ribonuclease Inhibitor 34 141 IPR032675 -
Acco01g0359 1300 ProSiteProfiles Leucine-rich repeat profile. 121 144 IPR001611 GO:0005515
Acco01g0359 1300 FunFam serine/threonine-protein kinase BRI1-like 2 1097 1300 - -
Acco01g0359 1300 FunFam Leucine-rich repeat receptor protein kinase EMS1 364 623 - -
Acco01g0359 1300 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 683 1295 - -
Acco01g0359 1300 Pfam Leucine rich repeat N-terminal domain 34 69 IPR013210 -
Acco01g0359 1300 CDD STKc_IRAK 1027 1297 - -
Acco01g0359 1300 SUPERFAMILY L domain-like 368 617 - -
Acco01g0359 1300 PRINTS Leucine-rich repeat signature 757 770 - -
Acco01g0359 1300 PRINTS Leucine-rich repeat signature 876 889 - -
Acco01g0359 1300 Gene3D Phosphorylase Kinase; domain 1 983 1096 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0359 Acco-ChrAcco01 4320083 4323985 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0359 30 1297 Receptor kinase-like Gene Family AT5G07280 58.006 0.0 1380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Acco01g0359 PK_Tyr_Ser-Thr 4.4e-45 CL0016