Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Acco01g0359 | ATGGCTTTATCTTTAAGTTTTCTTCTTCTTCATTTCCTTTTCGTGTTCCATCTCTCCCTTTTCCTTGCTTTTGCTTTCACGCACCAGGCTGATGAGAGTTCTGAGAAAAATCATCTTCTTTCTTTCAAAACCAGTCTCCATAACCCCCACCTTCTTGCTTCATGGAACTCCTCAACCCCTCATTGCAACTGGGTTGGCGTTAGTTGTGAACTCGATCGAGTTACCTCACTTTCTCTTCCCACTTTGCACCTCGAAGGCCCACTGCCTTCGTCTCTCTTCTCCCTTACTGGCCTTACCGTCCTCAACTTATTCTCCAACGCTCTCTCTGGTGATATTCCACCACAGATAGCTAATCTGAGAAACTTGAGGGAGCTCAATCTTAGTTATAATCAGTTTTCCGGCGATATTCCAGATGAGTTCAGCGGTTTGACTCAGCTTACAACTCTCGCACTCGGCTCCAACTGTTTTACCGGAAAAATCCCGCCGGAGCTGGGGTTCCTGTCACAGCTCCGTGTCCTCGACCTCTCTGGTAATGGCCTCACTGGAACGATACCGGAAAGCTTCGGAAACCTGAGTCAGCTTCAGTTCCTTGACCTCAGCAACAATCTTCTCTCAGGTTCTCTACCCTTGTCTATTTTCACGGGAACTCTGTCTTTGATTTCCGTTGACGTTTCAAACAATTCGTTTTCTGGTTCTCTGCCACCGGAAATCCGTAACTGGAGGAATATCACTGCCCTTTACATTGCCTCTTTTAAATTTACGGGTAGGTTGCCTCCTGAGGTTGGCGAGCTTTCGCGGCTTCAAGTGCTTTATGCACCTTCTAGTTCTATAGAAGGTCCATTGCCTGAAGAAATGTCGAAACTGAAGTCATTGTCTAATCTTGACCTTTCTTACAACCCCTTGAAGTGTTCGATACCGAAGTTTATTGGGAAACTTCAGAATTTGAAATTGCTCGACCTTTCTTTTGCTCAGCTTACAGGCTCCATTCCGTCTGAGCTTGGAAGTTGTAGAAACTTAAGTTCTGTGATGCTTTCTTTCAACTCGCTTTCTGGGTCATTGCCAGAGGAGCTTTCCGATCTTCCAATGGTGTCATTCATAGCTGAAAGGAACCAGTTTCATGGACCTTTGCCTGCTTGGCTCGGAAAGTGGAATCAGATTGATACTCTTTTGCTCTCGCAGAATAGATTTTCTGGTAACATTCCTCCTGAGCTTGGGAATTGCTCTTCATTGGAGCACCTCAGTTTGAGAAGTAACTTGCTGACAGGTCCCATTCCTGAGGAGCTATGTAATGCCGCTTCACTTATGGAGATTGACGTTGATGATAACTACCTTACTGGCACAATTGAGAAAGCATTTGTTAGGTGTAAGAACCTTGTCCAATTAGAATTGATGAAAAATCAGATCACTGGTTCCATCCCACAGTACCTTTCAGAGCTTCCTTTGATGGTGCTTGACCTTGACTCAAACAATTTTAGTGGAAGCATACCTACAAGTCTGTGGAATTCACCAACTCTAATGGAGTTTTCTGCTGCAAATAACCGTCTGCAGGGCTCTCTTCCTGCGGAGATTGGGAATGCAGTTCTTCTAGCCAGGCTTGTCCTTAATAACAATCAACTGACGGGTATTATACCCAAGGAAATTGGAAATCTCACGGGTCTGTCTGTTATTAATTTGAATGGAAATCTTTTTGAAGGGAACATCCCATCAGAGCTAGGAGATTGCATTTCACTTACAACCTTGGACCTTGGAAATAACCAACTAAATGGATCTATTCCAGATGAACTGGTGGAACTGAGCCAATTACAGTGTCTAGTTCTGTCCCATAATAATCTTTCTGGGTCTATTCCTGCAAAACAATCTTCATATTTTAGCAGAGTTGCCATCCCTGATTTGAGCTTTGTTCAGCACCTTGGAGTATTTGATCTGTCCCATAACAAATTGTCTGGGATTATACCTGATGAACTGGGGAGGTGTGTGGTCGTTGTGGATCTTTTGCTCAGCAACAACATCCTTTCTGGGAGTATCCCAAGCTCACTCTCTCGCCTGACAAATCTTACAACTCTAGATTTATCTGGTAACGTCTTGTCAGGTTCCATTCCACCAGAACTTGGAGATTCCCTCAAGCTACAAGGATTATATCTGGGGCATAATGAGCTTAATGGTACCATCCCTGAAAGTTTTGGTAAAATGAGCAGTTTGGTGAAGCTGAATTTGACAGGAAATAAGTTGTCTGGTTCGATTCCAATTAGCTGCGGGAACTTGAAGGAGCTTACTCACTTAGATTTGAGCTCTAATGAGCTTAGTGGCCAGCTTCCATATTCTCTATCAGGTCTTCAAAGCCTTGTTGGTCTTTATGTGCAGGAGAACAAGCTTTCTGGGCAAATAGATATGCTCTTCTCCAATACCATGACATGGAGGATTGAGACAATGAATTTGAGCGTCAATTGCTTCAGTGGGGATTTGCCAAGTTCTTTGGGAAACCTTTCGTTCTTGACAAATTTGGATGTTCATGGAAATATGTTCGTGGGAGGGATTCCATTGGAACTTGGGAATCTAGTGCAGCTGGAGTACGTCGATGTTTCTGGGAACAGGTTATATGGAAAGATTCCTGAGAAAATTTGCAGCCTAGTTAATCTGAACTACCTTGATTTGTCTCAGAACAGATTGGAAGGGCCTATACCCAGAAGCGGTATTTGCAAGAACCTATCAAGAGTTAGAATTACAGGAAACAAAAATCTCTGTGGGCGGATTTTGGGCGTTAATTGCCCAATCAAAAGCATTGGTAGATTTTCCTTGTCTAATGCGTGGCAACTTGCTGCGATTGCCATTACAATCACACTGATGACTCTGAGCGTTGCATTTGTTCTACACAGATGGATTGGCAGGAAGCAAAATGATCCGGAAGACCTTGAGGAACGCAAGCTAAACAACTATGTGGATCAAAATCTTTATTTCTTGACCAGTAGCAGATCAAAGGAACCTCTAAGCATAAATGTTGCAATGTTTGAGCAGCCTCTTCTAAAACTAACCTTGGAGGATATCCTTGAAGCTACTGGCAACTTCAGCAAGACTAACATAATTGGAGATGGAGGTTTTGGGACTGTATATAAAGCTACTTTGCTCAATGGCAAAACAGTTGCAGTAAAGAAGCTGAGTGAAGCTAAAACGCAGGGCCATCGCGAGTTCATGGCTGAAATGGAAACTTTGGGCAAGGTGAAACATCAGAATCTTGTTCCACTTCTTGGCTATTGCTCCTTGGGTGATGAAAAACTCCTTGTTTACGAATACATGGTGAATGGAAGCTTAGATCTATGGTTGAGAAACAGGACTGGTGGAGCCCTTGAAGTCCTTGACTGGAACAAAAGGTACAAAATTGCAACTGGTGCAGCCAGAGGATTAGCTTTCCTTCATCACGGGTTCATCCCCCACATCATTCACAGAGACATTAAAGCAAGCAACATATTGCTAAATAAAGATTTTGAGCCTAAAGTTGCAGACTTTGGACTTGCTAGGCTTATCAGTGCCTGTGAGTCACACATCAGCACTGACATTGCGGGAACATTTGGGTACATTCCGCCGGAGTATGGACAGAGTGGGAGGTCCACAACAAGAGGAGATGTCTATAGTTTTGGGGTCATTATGCTTGAACTAGTGACCGGAAAAGAACCGACAGGGCCTAATTTTAAAGACATTGAAGGTGGGAATCTGGTGGGGTGGGTACTTCTGAAGATCAAGAAGGGACAGGCTGCTGATGTTCTTGATCCAAAGGTTCTGGATGCCGATTCGAAGCCGATGATGCTTCGGGTGCTGCAGATTGCTTGTGCGTGCCTCTCTGATAATCCTGCAAACAGGCCTACCATGCTTCAGGTGCTCAAGCTTTTGAAGGGGATCAAAGGAGAGTAG | 3903 | 0.4394 | MALSLSFLLLHFLFVFHLSLFLAFAFTHQADESSEKNHLLSFKTSLHNPHLLASWNSSTPHCNWVGVSCELDRVTSLSLPTLHLEGPLPSSLFSLTGLTVLNLFSNALSGDIPPQIANLRNLRELNLSYNQFSGDIPDEFSGLTQLTTLALGSNCFTGKIPPELGFLSQLRVLDLSGNGLTGTIPESFGNLSQLQFLDLSNNLLSGSLPLSIFTGTLSLISVDVSNNSFSGSLPPEIRNWRNITALYIASFKFTGRLPPEVGELSRLQVLYAPSSSIEGPLPEEMSKLKSLSNLDLSYNPLKCSIPKFIGKLQNLKLLDLSFAQLTGSIPSELGSCRNLSSVMLSFNSLSGSLPEELSDLPMVSFIAERNQFHGPLPAWLGKWNQIDTLLLSQNRFSGNIPPELGNCSSLEHLSLRSNLLTGPIPEELCNAASLMEIDVDDNYLTGTIEKAFVRCKNLVQLELMKNQITGSIPQYLSELPLMVLDLDSNNFSGSIPTSLWNSPTLMEFSAANNRLQGSLPAEIGNAVLLARLVLNNNQLTGIIPKEIGNLTGLSVINLNGNLFEGNIPSELGDCISLTTLDLGNNQLNGSIPDELVELSQLQCLVLSHNNLSGSIPAKQSSYFSRVAIPDLSFVQHLGVFDLSHNKLSGIIPDELGRCVVVVDLLLSNNILSGSIPSSLSRLTNLTTLDLSGNVLSGSIPPELGDSLKLQGLYLGHNELNGTIPESFGKMSSLVKLNLTGNKLSGSIPISCGNLKELTHLDLSSNELSGQLPYSLSGLQSLVGLYVQENKLSGQIDMLFSNTMTWRIETMNLSVNCFSGDLPSSLGNLSFLTNLDVHGNMFVGGIPLELGNLVQLEYVDVSGNRLYGKIPEKICSLVNLNYLDLSQNRLEGPIPRSGICKNLSRVRITGNKNLCGRILGVNCPIKSIGRFSLSNAWQLAAIAITITLMTLSVAFVLHRWIGRKQNDPEDLEERKLNNYVDQNLYFLTSSRSKEPLSINVAMFEQPLLKLTLEDILEATGNFSKTNIIGDGGFGTVYKATLLNGKTVAVKKLSEAKTQGHREFMAEMETLGKVKHQNLVPLLGYCSLGDEKLLVYEYMVNGSLDLWLRNRTGGALEVLDWNKRYKIATGAARGLAFLHHGFIPHIIHRDIKASNILLNKDFEPKVADFGLARLISACESHISTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVIMLELVTGKEPTGPNFKDIEGGNLVGWVLLKIKKGQAADVLDPKVLDADSKPMMLRVLQIACACLSDNPANRPTMLQVLKLLKGIKGE | 1300 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Acco01g0359 | 1300 | ProSitePatterns | Protein kinases ATP-binding region signature. | 1027 | 1050 | IPR017441 | GO:0005524 | |
Acco01g0359 | 1300 | Gene3D | Ribonuclease Inhibitor | 142 | 216 | IPR032675 | - | |
Acco01g0359 | 1300 | FunFam | LRR receptor-like serine/threonine-protein kinase | 141 | 215 | - | - | |
Acco01g0359 | 1300 | FunFam | serine/threonine-protein kinase BRI1-like 2 | 982 | 1096 | - | - | |
Acco01g0359 | 1300 | ProSiteProfiles | Protein kinase domain profile. | 1021 | 1300 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Acco01g0359 | 1300 | Gene3D | Ribonuclease Inhibitor | 366 | 622 | IPR032675 | - | |
Acco01g0359 | 1300 | Gene3D | Ribonuclease Inhibitor | 623 | 925 | IPR032675 | - | |
Acco01g0359 | 1300 | Gene3D | Ribonuclease Inhibitor | 217 | 365 | IPR032675 | - | |
Acco01g0359 | 1300 | Pfam | Protein tyrosine and serine/threonine kinase | 1024 | 1293 | IPR001245 | GO:0004672|GO:0006468 | |
Acco01g0359 | 1300 | SUPERFAMILY | L domain-like | 632 | 915 | - | - | |
Acco01g0359 | 1300 | Pfam | Leucine Rich repeat | 683 | 697 | IPR001611 | GO:0005515 | |
Acco01g0359 | 1300 | SMART | serkin_6 | 1021 | 1294 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Acco01g0359 | 1300 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 630 | 926 | - | - | |
Acco01g0359 | 1300 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1097 | 1300 | - | - | |
Acco01g0359 | 1300 | SMART | LRR_sd22_2 | 754 | 780 | - | - | |
Acco01g0359 | 1300 | SMART | LRR_sd22_2 | 876 | 904 | - | - | |
Acco01g0359 | 1300 | SMART | LRR_sd22_2 | 288 | 317 | - | - | |
Acco01g0359 | 1300 | SMART | LRR_sd22_2 | 167 | 193 | - | - | |
Acco01g0359 | 1300 | SMART | LRR_sd22_2 | 455 | 478 | - | - | |
Acco01g0359 | 1300 | SMART | LRR_sd22_2 | 634 | 655 | - | - | |
Acco01g0359 | 1300 | SMART | LRR_sd22_2 | 682 | 714 | - | - | |
Acco01g0359 | 1300 | SMART | LRR_typ_2 | 191 | 215 | IPR003591 | - | |
Acco01g0359 | 1300 | SMART | LRR_typ_2 | 682 | 706 | IPR003591 | - | |
Acco01g0359 | 1300 | SMART | LRR_typ_2 | 852 | 876 | IPR003591 | - | |
Acco01g0359 | 1300 | SMART | LRR_typ_2 | 730 | 753 | IPR003591 | - | |
Acco01g0359 | 1300 | SMART | LRR_typ_2 | 634 | 658 | IPR003591 | - | |
Acco01g0359 | 1300 | SMART | LRR_typ_2 | 95 | 118 | IPR003591 | - | |
Acco01g0359 | 1300 | SMART | LRR_typ_2 | 119 | 142 | IPR003591 | - | |
Acco01g0359 | 1300 | SMART | LRR_typ_2 | 754 | 777 | IPR003591 | - | |
Acco01g0359 | 1300 | SMART | LRR_typ_2 | 167 | 190 | IPR003591 | - | |
Acco01g0359 | 1300 | SMART | LRR_typ_2 | 407 | 431 | IPR003591 | - | |
Acco01g0359 | 1300 | SMART | LRR_typ_2 | 550 | 574 | IPR003591 | - | |
Acco01g0359 | 1300 | SMART | LRR_typ_2 | 598 | 622 | IPR003591 | - | |
Acco01g0359 | 1300 | SMART | LRR_typ_2 | 312 | 336 | IPR003591 | - | |
Acco01g0359 | 1300 | SUPERFAMILY | Protein kinase-like (PK-like) | 1002 | 1294 | IPR011009 | - | |
Acco01g0359 | 1300 | FunFam | Leucine-rich repeat receptor-like kinase | 34 | 140 | - | - | |
Acco01g0359 | 1300 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1144 | 1156 | IPR008271 | GO:0004672|GO:0006468 | |
Acco01g0359 | 1300 | SUPERFAMILY | L domain-like | 49 | 363 | - | - | |
Acco01g0359 | 1300 | Pfam | Leucine rich repeat | 732 | 791 | IPR001611 | GO:0005515 | |
Acco01g0359 | 1300 | Pfam | Leucine rich repeat | 145 | 204 | IPR001611 | GO:0005515 | |
Acco01g0359 | 1300 | Pfam | Leucine Rich repeats (2 copies) | 96 | 137 | IPR025875 | - | |
Acco01g0359 | 1300 | FunFam | leucine-rich repeat receptor protein kinase EMS1 | 216 | 363 | - | - | |
Acco01g0359 | 1300 | Gene3D | Ribonuclease Inhibitor | 34 | 141 | IPR032675 | - | |
Acco01g0359 | 1300 | ProSiteProfiles | Leucine-rich repeat profile. | 121 | 144 | IPR001611 | GO:0005515 | |
Acco01g0359 | 1300 | FunFam | serine/threonine-protein kinase BRI1-like 2 | 1097 | 1300 | - | - | |
Acco01g0359 | 1300 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 364 | 623 | - | - | |
Acco01g0359 | 1300 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 683 | 1295 | - | - | |
Acco01g0359 | 1300 | Pfam | Leucine rich repeat N-terminal domain | 34 | 69 | IPR013210 | - | |
Acco01g0359 | 1300 | CDD | STKc_IRAK | 1027 | 1297 | - | - | |
Acco01g0359 | 1300 | SUPERFAMILY | L domain-like | 368 | 617 | - | - | |
Acco01g0359 | 1300 | PRINTS | Leucine-rich repeat signature | 757 | 770 | - | - | |
Acco01g0359 | 1300 | PRINTS | Leucine-rich repeat signature | 876 | 889 | - | - | |
Acco01g0359 | 1300 | Gene3D | Phosphorylase Kinase; domain 1 | 983 | 1096 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Acco01g0359 | Acco-ChrAcco01 | 4320083 | 4323985 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Acco01g0359 | 30 | 1297 | Receptor kinase-like Gene Family | AT5G07280 | 58.006 | 0.0 | 1380 |