Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0348 ATGGGTTTCCTCCGGCGAATTTTCGGCGGCAAAAAGCCGGCCTCTCCGTCAGTAGGCTCCCACAAGGCCGGCTCTGAAATTGTCAAGAGTAAACGGAGATGGAGTTTCATCAAACGCAGCAAAGACAAATCTCAAAGTGCTACTTCCGATCTCAATCACGGCGACCTTTCCACATCTTCGCTTCCGTATGGTGAATCCTTGAACGCTAATAAACATGCCATTGCAGTCGCCGCGGCGACGGCAGCCGTGGCGGAGGCCGCTCTGGCCGCCGCTCATGCGGCGGCGGAGGTGGTTAGACTTACGAATGGCGTCGGTGGCGGTTGCGGTCCAAGTGCAAGCCAGCACCGGTGGCCGGCAGAGATCGCCGCCGTTAAGATACAGTCGGCGTTTCGTGGTTACTTGGCAAAGAGAGCTCTGAGAGCACTAAAAGCATTGGTGAAGTTGCAAGCGCTGGTGAGAGGTCACATTGTAAGAAAGCAAACTACAGATATGTTGAGGCGCATGCAAACTTTGGTGAGGCTGCAGTCCCGTGCACGTGCAGGTCGCGTGCAGCTGTCGCATATTCTCCATTCTGCCAAGTCTCCACTCTCTCTTCACCTTGTCTCTGAACACTATGAATCCTCACTTAGAACCAACAGTACTAAATTTGAAGGTTCTCCTCTCCTCAAGAGATGCAGTTCCAATGCAAATTCTAGGGACATTGGTTCGGGGAGATCAAGGTTTGGATCGCAATGGTACGACCATTATTGGATGGAAGAAAATGTTTGGAACCATCCCAGAGGAGTAGACGATGAAAAGAGTGACAAAATTCTGGAAGTTGATACATGGAAGCCACACTTGAAATCCCAAAACGAGAGCCGTTTGGCATATGAGTCTCCCTCAAAGCGTTCAACAAGAAGTGTAAACCACAGTCTCTTCAGTTCCCTCAAGTTTCAGAATAGAAAAGAAGAGGAAGCTTCAAGAACAGCAGAGATAAACAACATCATCAAAGAACTCTCAGCCTCCTATTCATATCAGAACAGTCCTGAGTCATTTTCTGCTTCAAGGAGAAGAACAGGTCCTTTCACTCCCACAAGGAGTGAGTGTGGCTACTTTGGTCACCCAAACTATATGGCCAACACTGAGTCATCTCGAGCCAAGTCTAGGTCAGTGAGTGCCCCGAGGCAAAGACTTGGTGATTCTGGGAATAACTCAGATAGGCATGCTGATCTAAGAAGCCAATGTTTCACATCTTCAGGCCGCTTGAACAGAGTCTTAGGTACCCGTCTAAGGTGA 1275 0.4941 MGFLRRIFGGKKPASPSVGSHKAGSEIVKSKRRWSFIKRSKDKSQSATSDLNHGDLSTSSLPYGESLNANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTNGVGGGCGPSASQHRWPAEIAAVKIQSAFRGYLAKRALRALKALVKLQALVRGHIVRKQTTDMLRRMQTLVRLQSRARAGRVQLSHILHSAKSPLSLHLVSEHYESSLRTNSTKFEGSPLLKRCSSNANSRDIGSGRSRFGSQWYDHYWMEENVWNHPRGVDDEKSDKILEVDTWKPHLKSQNESRLAYESPSKRSTRSVNHSLFSSLKFQNRKEEEASRTAEINNIIKELSASYSYQNSPESFSASRRRTGPFTPTRSECGYFGHPNYMANTESSRAKSRSVSAPRQRLGDSGNNSDRHADLRSQCFTSSGRLNRVLGTRLR 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0348 424 SMART iq_5 141 162 IPR000048 GO:0005515
Acco01g0348 424 SMART iq_5 118 140 IPR000048 GO:0005515
Acco01g0348 424 MobiDBLite consensus disorder prediction 1 27 - -
Acco01g0348 424 MobiDBLite consensus disorder prediction 370 393 - -
Acco01g0348 424 Gene3D - 119 170 - -
Acco01g0348 424 Pfam Protein of unknown function (DUF4005) 339 401 IPR025064 -
Acco01g0348 424 ProSiteProfiles IQ motif profile. 119 147 IPR000048 GO:0005515
Acco01g0348 424 MobiDBLite consensus disorder prediction 340 407 - -
Acco01g0348 424 ProSiteProfiles IQ motif profile. 143 170 IPR000048 GO:0005515
Acco01g0348 424 PANTHER IQ-DOMAIN 5-RELATED 29 401 - -
Acco01g0348 424 MobiDBLite consensus disorder prediction 340 355 - -
Acco01g0348 424 Pfam IQ calmodulin-binding motif 143 160 IPR000048 GO:0005515
Acco01g0348 424 Pfam IQ calmodulin-binding motif 122 140 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0348 Acco-ChrAcco01 4217700 4220211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0348 1 422 IQD Protein Family AT5G07240 44.018 6.63e-60 199