Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Acco01g0335 | ATGTATTCAAGCGAGCTTCACCTCCCAGTTGACATTCAGTCTGAAGAGTTGGATCCTGATGTGCGGCATATTGTTGAGGACTTGTGGGGCGTTCAAGAGATGTCTTTAGGAAAAAAATCACATTTGCCTTCCATTTTCCATGCCTTTTGCCCTGCCTTCAATTTATCAGACATGTTTGAAGACCTACACTTTTGGATTCTTGTTCTTGACATCAATTTGTTCATTACTCAAGGGTTTGCCTTCATCTACATGGAAGATGAGAGAGATGCTGAGGCTGCAATTCGTGCACTTGATCGGGTAGAATTTGGTCGATCGGGACGCAGACTTCGTGTGGAATGGACAAAAAATGAACGCGGTGGCATTAGAAGGCCTGGTAGTTCAAGAAGATCTTCAGCAAATTCGAGGCCATCAAAGACTTTATTTGTTATTAATTTTGATACAAATCATACCAGGACTAGGGATTTGGAGAGACACTTTGAGCCATATGGCAAGATCATTAATGTGAGGATTAAAAGGAATTTTGCATTTGTCCAGTATGACTCATATGATGATGCCATCAAAGCATTGGAAGCTACAAATATGAGCAAGTTACTGGATCGAGTCATCACAGTTGAATTTGCTGCGGAGAATGATGATGACAGGAGGAATGCACACAGTCCTGATAGAAGCCATGATCGTCCACGCGATATAAGCTATGATAGAAGGCGATCACCTAGTCCTTATCACCGAGAAAGAGGCAGCCCTGACTATGGTCGTGGCTCTAGCCCATATAGGAGAGAGAGGAGCAGCCCTGACTATGGTCACGACCGTAGTCAGAGTTCCCGACAGATTGAGAGAGGTAGCCCTGATTATAATCGCAGAGGTAGCCCCAATTGTAATCGCAGGAGCCGTAGTCCATATAGAAGAGATAGGGGTGGTTCTGATCCAGTTCATGGTTCTAGCCATAGTCCTGATCATAAAGAACAAGCTAGAACTGACCGTGGCAATTCTCACTCCCATAGTCCTGATGAAGGAGAGAGGATAAGCCCTCAAAATGGTGGTTCTGACAACAGCCCTTCCTATAGGAAGAGGGTTAGCCCTGAAAATGGTCATGGCTCTACAAGTAGTCCTGATGCTAGAGGTGAGTATAGTCCTTCCAATGGTGATGAAGATCGTGTAATTTCCGCGCCTGAGCCAAAGGACAATGCTGAACATGGTGCTGCTGCTGAAAGTCCCATGAATGAAACAGACCGCAGCCAATCTCCTGCTGCTGAAGAATGA | 1260 | 0.4508 | MYSSELHLPVDIQSEELDPDVRHIVEDLWGVQEMSLGKKSHLPSIFHAFCPAFNLSDMFEDLHFWILVLDINLFITQGFAFIYMEDERDAEAAIRALDRVEFGRSGRRLRVEWTKNERGGIRRPGSSRRSSANSRPSKTLFVINFDTNHTRTRDLERHFEPYGKIINVRIKRNFAFVQYDSYDDAIKALEATNMSKLLDRVITVEFAAENDDDRRNAHSPDRSHDRPRDISYDRRRSPSPYHRERGSPDYGRGSSPYRRERSSPDYGHDRSQSSRQIERGSPDYNRRGSPNCNRRSRSPYRRDRGGSDPVHGSSHSPDHKEQARTDRGNSHSHSPDEGERISPQNGGSDNSPSYRKRVSPENGHGSTSSPDARGEYSPSNGDEDRVISAPEPKDNAEHGAAAESPMNETDRSQSPAAEE | 419 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Acco01g0335 | 419 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 138 | 209 | IPR000504 | GO:0003723 | |
Acco01g0335 | 419 | MobiDBLite | consensus disorder prediction | 212 | 419 | - | - | |
Acco01g0335 | 419 | MobiDBLite | consensus disorder prediction | 339 | 375 | - | - | |
Acco01g0335 | 419 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 70 | 103 | IPR000504 | GO:0003723 | |
Acco01g0335 | 419 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 140 | 202 | IPR000504 | GO:0003723 | |
Acco01g0335 | 419 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 54 | 116 | IPR000504 | GO:0003723 | |
Acco01g0335 | 419 | SUPERFAMILY | RNA-binding domain, RBD | 68 | 213 | IPR035979 | GO:0003676 | |
Acco01g0335 | 419 | PANTHER | SERINE/ARGININE RICH SPLICING FACTOR | 70 | 153 | - | - | |
Acco01g0335 | 419 | Gene3D | - | 67 | 129 | IPR012677 | - | |
Acco01g0335 | 419 | Gene3D | - | 130 | 223 | IPR012677 | - | |
Acco01g0335 | 419 | MobiDBLite | consensus disorder prediction | 212 | 282 | - | - | |
Acco01g0335 | 419 | MobiDBLite | consensus disorder prediction | 296 | 338 | - | - | |
Acco01g0335 | 419 | SMART | rrm1_1 | 139 | 205 | IPR000504 | GO:0003723 | |
Acco01g0335 | 419 | SMART | rrm1_1 | 44 | 112 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Acco01g0335 | Acco-ChrAcco01 | 4026785 | 4029010 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Acco01g0335 | 76 | 230 | Eukaryotic Initiation Factors Gene Family | AT3G16380 | 23.602 | 6.06e-06 | 46.6 |