Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0333 ATGGCGGATGCTTTGGTCGGTGGGGCTTTTCTTCAGCTGGCTTTCGACAGGCTGGCTTCTCCCCATGTTTTGGACTTCTTCAAAAAACCAAAATTGAACCAGAAATTGGTCAGTAAGTTGAAGATCGTGCTGTTATCCATCGATGCTGTGGTTGACGATGCAGAGCAAAAGCAGATCACCAATCCCAAGGTGAAAGACTGGATTGACTTGGTCAAAGATGCTGCGTTTGATGCCGAGGATGTCTTAGATGAGATTGATTATGAAATGTGCAAACGCGAGCTGGAAGCCGAACAAAAGAGTCAAACCAGTGCTATTGGCAAGGTACGAAACTTCTTTAGTGCTCCTGTTAATTCATTTGAGAAGGAAATTGAATCCAAAATGAGAAGTAGCCTTGAAAATCTAGAATATCTTGCATCTCAAAGGGATATATTAAGATTGAATGAACGTGATGGCGATTCTCGGATGAGAAGTGAGATGCCAAACAGATTGCCAACTACATCTTTAGTGGATGAGGATGCGACATATGGTAGAGATGACGACAAAAACACCATCATTGAATGGCTGCTGTCAGAAAAGTATAACGGCCAACTATCTGTGATTTCTATTGTAGGTATGGGCGGTCTGGGTAAAACTACTCTTGCCCAACTTGTTTATAATGATAGAAGGGTGATGGATGAGTTCAACCTCAAAGTATGGGTGTGTGTCTCTGATGAGTTTGATGTCTTGAGGGTAACAAGAACGATTTATGAGGCAATCACTGGTTCTAAGGAAGATACCAATGATTTAGATATGCTTCAAATTAAATTGAAACAACAACTAACTAAGAAGAGATTTCTTCTTGTTTTAGATGACGTATGGAATGAAAATTATATGATATGGGAGGCCTTGCAATCGCCATTGAATCATGGGGCTTTAGGAAGCAAAATTATTCTAACCACTCGCAGTGTAAAAGTTGCTTCAACCATGCGTTCTACCAGAATACTTCCTTTGAAACCCTTATCAGAAGGAGATAGTTGGTCATTATTTAGCAGATATGCATTCCATGATGAAAATGTTCTTTGTTCAAACTCTGACCTTGAAGAAATTGGAAGGAAAATCAGTAAAAAGTGCAAAGGGCTACCTTTAGCTTTGAAAGCCATCGGGAGTCTCTTATACACGGAATTATCTCATGAGCAATGGAACGACATTCTGAAAAGAAATCTGAAACTTCTACGTTATTTGGACCTCTCGGGAACTAAAATAAGGAAACTGCCTGATTCATTATGTCAACTTCATCTTTTGCAAACACTAAAGTTGTGGCGCTGTCGTCGTTTGGAAAGGTTACCAATGAATTTCCACAAACTCATCAATCTTTGTCACCTTGATTTTCGCGAAACTCAGGTGAGAGAGATGCCACAGCAATTGGATAAATTGAAAAGACTTCAAGTGTTGTCATCATTCATTATAGACAAATGTGGAGAGACCAGCCTCAAACTTTTAGAAGGACTTAATCTTCATGGATCAATTTCCATCTCGGAATTGCAAAATATAGTTTCTCCCTCAGTTGCTTTAGCAGTCAATTTGAGAAACAAGATACGCCTTAAGGAGTTGACATTAGAATGGTGCATTGACAATAAAAAATCACAACTTGAAAAGGATGTGCTGGAGAGTTTCCAACCTCATCAAAATTTGAAAACACTATCAATTGGCAACTATGGCGGTATCGAGTTTCCAAATTGGCTTGCAGATCATTCATTGTCCAATATAGTTGCCCTCGAGCTAAGGAATTGCAAATACTGTATTTCCTTGCCATCATTTGGCCTCTTTCCATCTCTCAAGTCACTGTCAATTATAGGGTTTCATAGCATCGTAGCTATTGGTCCCGAATTTTGTGGAACTAGCTCTAATGCTTTGTCCCTAGAAATCTTGAGGTTTGGAGATATGAAGGGATGGGAGGAATGGATATGTGAAAATATGTCTCTTACTTTTCCTCATCTTCAAGAGTTGGGTATAGAAAATTGTCCCAAATTGAAAGGGCAACTTCCTCAACAACTTCCTTCTTTGAGGATGCTAGTAATTTGCAATTGTGAGAAGCTGTTGTCTTCAATTCCATGGGCTCCATCTCTAAATATATTGGTTCTTAGAGATTGTGGAAACGAGCAGTTGGAAAGTCTTCCATCAACTCTAGAGGTCCTTGACATTTCTGGAGGCTTTGATAAATTATTAGCGGTTGACAAAGTTGGGAATATGATTGCCAATTGTAGCCTTGAAGAGTTGAAGGTTTCCGATTGTCCGCAGTTGGAATTCCCACGGTGCTATTGTGATAACTTCATTCTTGAAATGGAGATAAGAGGAAGTTGTGACTCTCTTAAGTCATTTCCACTAGATTTATTTCCAAACCTTCAATCATTGAAGTTGGCTGATTGTAATAATCTTGAAATGATAACTATTTCAGAGGGGCACCATCATTCTCTTTCAACCCTATACATACAAAAGTGTTCCAAATTTGTATATTTTCCTGAAGGAGGGTTTTTGGCCCCGAAACTAGTATTGTGTTGCGTTGAAGACTTGAAGAATTTGAAATCACTACCGGAGAAGATGAGCATTCTCTTTCCCTCCTTGACATATTTGTTAATAAAATGCTGCCCACAAGTGGAATCATTTCCAAAGGGAGGTTTCCCATCAGGCCTTTTATATCTTTGTGTCGTAGAATGCCCGAAATTCGTTGTCTCTCGAATGGGATGGAATCTGAGTAGCCTTACTTCACTACAATACTTAGGGATTGGAGATGTAGATGATAAGTCTCTTCCTGATATCGGACTACTTCCACCTACTCTCATTGGCCTTGAGGTCGATAACTGCCCAAATCTTACATTATTGGAACACAAAGGTCTTTGCCACCTATCTTCTTTGGAAGTCTTGATATTTTGTGGCTGTCCTAAACTCCAATACTTTCCAAAGGAGGGGTTGCCCAGTTCTCTTTGTCAACTATGGATCAAGGGTTGTCCCTTGCTCAAAAAGCGAATACAAAAACAAAAAGGAAAATATTGGGCAAAGATTTCTCACATCCCTTTTATTGGCTTTGATGATTATGAGACTCAAACTTTCAGTGAGCTCCTCACTAATGAGGGCCTCAGTCTTCGTACTATCCATTCACTTTTTAGTGTTGCACATCATAGTGCTGCCGAGCAATCCTACAAACAAACCCACCTCCCTGTGGGCATTGTTTGCCGTGGCACTGTGTTGCACAATGCTTGTGCAGAGGACAAACATTACCCAGAAAGTAGATGGAGGTTTCATTCAGAGACAATGGCTTTTAATTCTCCCCAAGTTGTTGACTGTGCGAGATTCAACATCACTATCTTGCTCGTGGACAATGATACCACCACTCTCTCTGTCAACGCTGGTTTTCTCAGATCATGGCAATACAGAGTTGCAACAGCTACAAGTGGTCATGAAGCTTTGAAGACTCTTAGAGAATTTAGAGGCTTTTTCGACCTCGTCATCACTGACCTTAACATGAGAGGAATCAATGGCATTGAACTCCAAAAACTTGTCAAACGAGAATTCGATCTTCCAGTCATCATTATGTCTGTAGATTGGAGGAAGAATGTGATGTCGAGGAATCTAGAGCATGAAGCAGCATATTGCATGGCCAAGCCAATACGAAGAGAGGACGTAAAAGATGTGTGGCAATATGTTGTGAATGGGAGGAGAGAAAAACTAAGAATTGAGAATGACAAAATAGTGTCAGTAAGCGAAGAAGAAGAAGAAGAAGGAGACTCATCACCACCACGAACTGTTAATTCAGCATCGCCTGAAAAGCAAAGGAAGAAGTATTGCAAGAGAAAGCGTAGTGATGAGGTGATTGAGAATAAAGAACTCATATTCTGTGGTCCAAAGAGATCCAAGATTTTCTGGACTAGTAATCTTCACAATCGCTTCTTGTTGGCCATAGACTACATTGGCATGGACAGGGCTGTTCCAACAAAGATTCTTGAGATCATGAACGTGCCAGGTTTGACTAGAGAAAATGTTGCCAGTCATTTGCAGAAGTACCGACTGTTTCTGAAGAAAATTGCCGAGAAAGGAATCCTTGAGGGATTATCAGAGAGAGCCTTAAGGTCAAAGTTTGCTATGGGACTTCCCACAGATCTCATCAGAGACCTTAAAAGGAGAGTTAGTCATTTTCGTGGTCATGAAAATTATTATCAACAACGTTATGGTACCGTTGTGTCTAGGCATCTTACAACCAGATCCCTTCTCAGCAATCAAACTAGACTGACTCAACCAAACCACTATGGTACCGATCATACTTACAGAAACTTCCAACAGAATCAAGCAACTCATCATAATCGTCCCAGCGCAAATGGAGGGTTCATGACTTCAGCAAATGCCCTCACTGCAAATGGTTTGATGAGTAACTATACCTCACTGGGGAATGGCAGAAACTTCAACTATGTCCCAACTAATTATGACAATAAGAACAATCGTGGGATGGTAATGCCTTATGGAAGCTTTGGCCTGCAACGAACTCCTTGGACATATAATCACCGCCATGGAGCTCAACTAAATAACAATTATAATAACCATGGGATGATAATGCCTTATGAAAGTTCTGGCTTGCACCGAAGTCCCAGTACTTATAACAGCCACAGTGGAATTCAACTAAACAACAATGCTTCTCTTACATTTGGTGCGTTGAATCGAGTTCCTAATGTTGGTTATACAGGCCAAAATAACAACGACAATTACAACAACAACAACATATTTGGCTTGTTAAGTAATGGGAGTGCTTCAAACGACGCATCTGTGCCAATCCCATCCTCATTTGTGAATGTTTGTGTCGAACCAAATCAAGCAAACGTGTCTGCAGGCTTCCCATCTTTGCCTCAGAAGTCGATTGATGGTATAAGGAATGCTGGAGGTGGTAATCATAAGCAACATAGTATTGATACTTCAGAGAATCATTTGGAAGCTGGCCGAATAGATGATCTTGATGAACTTTTCCTAATGCTAAACGACATGGTTCTTCCTGATAATGGGGTCTTCTCCAATCAGACTGAAGAGAGGCCTCATGCTGGTGCACGTTCGACTTCTGACATTCTTAGCTCCTTCAATATCAAAGACTGCATTGAGCTGGGAGATAGTGATCATGTGACCGCTCAAACAAATGAAAGAAGCATCAATGTTCCACCGAACAAGTCCTCATCTTGCACCAATGAAAACCCTAATCTGGTGAGGAACGATACATCCACAGACTTGGAACCCATGGACATGTTCATGGCGGACCAGCAGGCTAAGTCCTCAGCTGGAAACCCAACTCCTCCAGAACAGGCTAGTTTTGTTTGCTATTTAGATCAGTTAACGACTCTAATTAGGATTGATGAAAATACTTATTGA 5382 0.4065 MADALVGGAFLQLAFDRLASPHVLDFFKKPKLNQKLVSKLKIVLLSIDAVVDDAEQKQITNPKVKDWIDLVKDAAFDAEDVLDEIDYEMCKRELEAEQKSQTSAIGKVRNFFSAPVNSFEKEIESKMRSSLENLEYLASQRDILRLNERDGDSRMRSEMPNRLPTTSLVDEDATYGRDDDKNTIIEWLLSEKYNGQLSVISIVGMGGLGKTTLAQLVYNDRRVMDEFNLKVWVCVSDEFDVLRVTRTIYEAITGSKEDTNDLDMLQIKLKQQLTKKRFLLVLDDVWNENYMIWEALQSPLNHGALGSKIILTTRSVKVASTMRSTRILPLKPLSEGDSWSLFSRYAFHDENVLCSNSDLEEIGRKISKKCKGLPLALKAIGSLLYTELSHEQWNDILKRNLKLLRYLDLSGTKIRKLPDSLCQLHLLQTLKLWRCRRLERLPMNFHKLINLCHLDFRETQVREMPQQLDKLKRLQVLSSFIIDKCGETSLKLLEGLNLHGSISISELQNIVSPSVALAVNLRNKIRLKELTLEWCIDNKKSQLEKDVLESFQPHQNLKTLSIGNYGGIEFPNWLADHSLSNIVALELRNCKYCISLPSFGLFPSLKSLSIIGFHSIVAIGPEFCGTSSNALSLEILRFGDMKGWEEWICENMSLTFPHLQELGIENCPKLKGQLPQQLPSLRMLVICNCEKLLSSIPWAPSLNILVLRDCGNEQLESLPSTLEVLDISGGFDKLLAVDKVGNMIANCSLEELKVSDCPQLEFPRCYCDNFILEMEIRGSCDSLKSFPLDLFPNLQSLKLADCNNLEMITISEGHHHSLSTLYIQKCSKFVYFPEGGFLAPKLVLCCVEDLKNLKSLPEKMSILFPSLTYLLIKCCPQVESFPKGGFPSGLLYLCVVECPKFVVSRMGWNLSSLTSLQYLGIGDVDDKSLPDIGLLPPTLIGLEVDNCPNLTLLEHKGLCHLSSLEVLIFCGCPKLQYFPKEGLPSSLCQLWIKGCPLLKKRIQKQKGKYWAKISHIPFIGFDDYETQTFSELLTNEGLSLRTIHSLFSVAHHSAAEQSYKQTHLPVGIVCRGTVLHNACAEDKHYPESRWRFHSETMAFNSPQVVDCARFNITILLVDNDTTTLSVNAGFLRSWQYRVATATSGHEALKTLREFRGFFDLVITDLNMRGINGIELQKLVKREFDLPVIIMSVDWRKNVMSRNLEHEAAYCMAKPIRREDVKDVWQYVVNGRREKLRIENDKIVSVSEEEEEEGDSSPPRTVNSASPEKQRKKYCKRKRSDEVIENKELIFCGPKRSKIFWTSNLHNRFLLAIDYIGMDRAVPTKILEIMNVPGLTRENVASHLQKYRLFLKKIAEKGILEGLSERALRSKFAMGLPTDLIRDLKRRVSHFRGHENYYQQRYGTVVSRHLTTRSLLSNQTRLTQPNHYGTDHTYRNFQQNQATHHNRPSANGGFMTSANALTANGLMSNYTSLGNGRNFNYVPTNYDNKNNRGMVMPYGSFGLQRTPWTYNHRHGAQLNNNYNNHGMIMPYESSGLHRSPSTYNSHSGIQLNNNASLTFGALNRVPNVGYTGQNNNDNYNNNNIFGLLSNGSASNDASVPIPSSFVNVCVEPNQANVSAGFPSLPQKSIDGIRNAGGGNHKQHSIDTSENHLEAGRIDDLDELFLMLNDMVLPDNGVFSNQTEERPHAGARSTSDILSSFNIKDCIELGDSDHVTAQTNERSINVPPNKSSSCTNENPNLVRNDTSTDLEPMDMFMADQQAKSSAGNPTPPEQASFVCYLDQLTTLIRIDENTY 1793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0333 1793 Pfam Rx N-terminal domain 9 99 IPR041118 -
Acco01g0333 1793 FunFam Two-component response regulator 1292 1354 - -
Acco01g0333 1793 Pfam Response regulator receiver domain 1114 1222 IPR001789 GO:0000160
Acco01g0333 1793 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 413 477 IPR039203 GO:0050832
Acco01g0333 1793 CDD REC_typeB_ARR-like 1114 1228 - -
Acco01g0333 1793 SUPERFAMILY L domain-like 782 1014 - -
Acco01g0333 1793 SUPERFAMILY Homeodomain-like 1293 1352 IPR009057 -
Acco01g0333 1793 Gene3D - 1293 1354 - -
Acco01g0333 1793 Gene3D - 21 123 - -
Acco01g0333 1793 ProSiteProfiles Response regulatory domain profile. 1113 1228 IPR001789 GO:0000160
Acco01g0333 1793 SUPERFAMILY CheY-like 1112 1234 IPR011006 -
Acco01g0333 1793 SUPERFAMILY L domain-like 349 763 - -
Acco01g0333 1793 Pfam NB-ARC domain 178 398 IPR002182 GO:0043531
Acco01g0333 1793 MobiDBLite consensus disorder prediction 1246 1273 - -
Acco01g0333 1793 FunFam Probable disease resistance protein At1g61300 159 326 - -
Acco01g0333 1793 Gene3D Ribonuclease Inhibitor 354 763 IPR032675 -
Acco01g0333 1793 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 404 IPR027417 -
Acco01g0333 1793 Gene3D Ribonuclease Inhibitor 778 1017 IPR032675 -
Acco01g0333 1793 Gene3D - 156 327 IPR027417 -
Acco01g0333 1793 Gene3D - 1112 1285 - -
Acco01g0333 1793 SMART REC_2 1112 1224 IPR001789 GO:0000160
Acco01g0333 1793 Coils Coil 1232 1252 - -
Acco01g0333 1793 NCBIfam myb-like DNA-binding domain, SHAQKYF class 1296 1349 IPR006447 GO:0003677
Acco01g0333 1793 PRINTS Disease resistance protein signature 676 692 - -
Acco01g0333 1793 PRINTS Disease resistance protein signature 370 384 - -
Acco01g0333 1793 PRINTS Disease resistance protein signature 272 286 - -
Acco01g0333 1793 PRINTS Disease resistance protein signature 199 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0333 Acco-ChrAcco01 3989370 4000023 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0333 1112 1371 Response Regulator Gene Family AT5G07210 38.144 9.37e-44 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco01g0333 NB-ARC 5e-54 CL0023