Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0331 ATGGATAGCAACTTGCCTCCGCCTGAAAAATCTTCTGATTCTTCGCCTTCTTCTGCTGTTGCTCCTTCGGTTTTACAAGTTCCTTCTTCTCATGAGTCGTCTTTGTCGTCTCCGAGGGCGGCGAGATCGCCGTCGTCTTCGGGTCAGCATACCAGCAGGAGGCACTCTACTTTCCGGGGAATCCGGAGCCGGAGCGGGAAATGGGTGTCGGAGATACGGGAGCCTCGTAAATCCACGCGCATTTGGCTGGGTACGTACCCGACGCCGGAGATGGCCGCCGCCGCGTATGACGTGGCGGTGCTTGCGTTAAAGGGGCCTGACACTACCCTCAACTTCCCCAACTTGATCCTCTCTTACCCGATCCCAGCGTCATTGTCGGCCACAGATATTCGGGCTGCGGCATCAGCCGCCGCCGAGGCGAGGCTGGTGAGGTCTACGGAAAGCGGAGGACAAGACGCAGGAGGCGAAGGAGGAAACCAAGGCGAGGGCTGGAGCCGGAGCGGCGGAGAAGTTGCGACGACGGATAAAAGCGAGGAATTTATCGATGAGGACGAGCTATTGAATATGCCGAGTTTGCTGGATGACATGGCGAGGGGAATGCAGGTGAGTCCGCCGAGGATGAAGTCACCGAACGCTTCTGATGATTCGCCGCCTAATTCAGATCATGGAGATAGCCTCTGGAGTTTTTGA 690 0.571 MDSNLPPPEKSSDSSPSSAVAPSVLQVPSSHESSLSSPRAARSPSSSGQHTSRRHSTFRGIRSRSGKWVSEIREPRKSTRIWLGTYPTPEMAAAAYDVAVLALKGPDTTLNFPNLILSYPIPASLSATDIRAAASAAAEARLVRSTESGGQDAGGEGGNQGEGWSRSGGEVATTDKSEEFIDEDELLNMPSLLDDMARGMQVSPPRMKSPNASDDSPPNSDHGDSLWSF 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0331 229 Gene3D AP2/ERF domain 57 114 IPR036955 GO:0003700|GO:0006355
Acco01g0331 229 SMART rav1_2 57 119 IPR001471 GO:0003700|GO:0006355
Acco01g0331 229 MobiDBLite consensus disorder prediction 1 54 - -
Acco01g0331 229 CDD AP2 56 115 IPR001471 GO:0003700|GO:0006355
Acco01g0331 229 ProSiteProfiles AP2/ERF domain profile. 57 113 IPR001471 GO:0003700|GO:0006355
Acco01g0331 229 MobiDBLite consensus disorder prediction 144 229 - -
Acco01g0331 229 MobiDBLite consensus disorder prediction 206 229 - -
Acco01g0331 229 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 11 228 IPR045277 GO:0003700
Acco01g0331 229 MobiDBLite consensus disorder prediction 1 71 - -
Acco01g0331 229 Pfam AP2 domain 58 105 IPR001471 GO:0003700|GO:0006355
Acco01g0331 229 SUPERFAMILY DNA-binding domain 56 114 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0331 Acco-ChrAcco01 3951353 3952042 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0331 52 229 AP2-EREBP Transcription Factor Family AT5G52020 59.218 1.35e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco01g0331 AP2 1.5e-09 CL0081