Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0306 ATGATGAACCCGTTGCCTCCATTTAGCGATGAAGATTTGTTCTTCCAAATTTCAGTTCTGAATAGTCGTTCTTCTCTCTCGATCCAAACAATCCCAGAACATGAGATCCTTCATGATCCTGCAGAAACAGTGAATAATTTTGGAAGTGAAGAAGTAATACCAAAGGGAAAGGGCAAGCAAAAGAAGCAAAAGGAATGTCCAGCTAAAATTGCAGAAGATGGTAGCAAGAAATTGATTCATAGAGAGACAGAAAGACAAAGAAGACAAGAAATGGCCAGTCTATGTGCCTCCCTCAGATCGTCTTTGCCTCTCGAATATATCAGAGGAAAGCGATCAACTTCAGATCACATTGATGGGGCTGTGAAATATATCAAACACCTAAGGAAAAAAGTGAAGCAATTGAAGGAAAAGAGAGATGAGTTGATAAAAAACGGACATAGAATCTCTGTTATTGTTCATCCTTACAAGGTTGGAGTTGAGATTATGTGCAGTTATAGTTTCAGAGAGTATTTATTTACTCAGTCAAATCTCTTGAGTATTTTGATTAAAGAAGGGTTTAACGTGGTGAGCTGCACTTCTATCAAAAGGGATGAGATGTTCATTCACACAATTCGATTAGAGGAGTCTGATATCTATGGAAGTACTACTGACTACTCTGAACTGAAAAGAAAGCTCACTGCAGAAATATTATCTACAGAACATAGAGAGACTGCATCTGAACCAGAAAACTTCTGA 735 0.3796 MMNPLPPFSDEDLFFQISVLNSRSSLSIQTIPEHEILHDPAETVNNFGSEEVIPKGKGKQKKQKECPAKIAEDGSKKLIHRETERQRRQEMASLCASLRSSLPLEYIRGKRSTSDHIDGAVKYIKHLRKKVKQLKEKRDELIKNGHRISVIVHPYKVGVEIMCSYSFREYLFTQSNLLSILIKEGFNVVSCTSIKRDEMFIHTIRLEESDIYGSTTDYSELKRKLTAEILSTEHRETASEPENF 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0306 244 CDD bHLH_AtORG2_like 76 143 - -
Acco01g0306 244 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 74 153 IPR036638 GO:0046983
Acco01g0306 244 Gene3D - 68 153 IPR036638 GO:0046983
Acco01g0306 244 SMART finulus 81 133 IPR011598 GO:0046983
Acco01g0306 244 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 127 IPR011598 GO:0046983
Acco01g0306 244 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 63 226 - -
Acco01g0306 244 Pfam Helix-loop-helix DNA-binding domain 77 128 IPR011598 GO:0046983
Acco01g0306 244 Coils Coil 117 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0306 Acco-ChrAcco01 3600369 3601595 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0306 76 225 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 41.765 4.08e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco01g0306 HLH 6e-09 No_clan