Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0304 ATGTTTCCTTCACACCAACGAGGCAACAATGAGAGGGTCATTGAATTTTCTAGCCGTCCCCACCACCATTACCAGAAAATCTCAGAGGTTCTCATTCTGGACGCCGGTCATGCTCATGATCATGGTTCTCTGGACATCATCAATTTCTCCGATAAAAAATTGCAAAGTATTAGTACCAACAAGCTACTTTATGAGTCTACAGCTAGTGGTGAGATTAACCACTATCGAAATTCTGATAAAAAGGACTTCAAGAAGAAGAACGAGAAGCTCATTCACAGAGAAATTGAGAGGCAAAGAAGACAAGACATGGCTACTCTCAATGCTTCCCTTAGATCTCTTCTTCCACTCGAGTTCATCAAGGGGAAGCGTTCGCTGGCAGATCACATGAATGAAGCGAAGAACCACATAAAGCACCTGCAACAGAGAATCAAAGAACTGACCGCTAAGAGAGATGAACTGAAGAAACTAACAGAGAATAATTTTTCAAATCCAGAAGAAACACACGGGTGCGAAAAGTACACATATAGCGGCTTTTTCAGTGTTAACAAGATTAATAACAATGTTGGTGTTGGAATAGAAGTTTCTAGTTCCTTCGTTGAGGAAAGGTTGTTTCCCCTTTCAAAATTTCTTAAATTAATGCTTGACGAAGGACCTCGAGCCGTTAATTGTGTCACCAGCCAAATCAATGGAAGATTAATTCACAGTGTTCAGTGTGAGGTTACTAACAGTTCCGACGACCGTGCGGACCTACCCGCGCTGAGAAGGAAAATTGTCAATCTAGTCTCATCATTTAAATGTTCTGATTAA 807 0.4102 MFPSHQRGNNERVIEFSSRPHHHYQKISEVLILDAGHAHDHGSLDIINFSDKKLQSISTNKLLYESTASGEINHYRNSDKKDFKKKNEKLIHREIERQRRQDMATLNASLRSLLPLEFIKGKRSLADHMNEAKNHIKHLQQRIKELTAKRDELKKLTENNFSNPEETHGCEKYTYSGFFSVNKINNNVGVGIEVSSSFVEERLFPLSKFLKLMLDEGPRAVNCVTSQINGRLIHSVQCEVTNSSDDRADLPALRRKIVNLVSSFKCSD 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0304 268 FunFam Transcription factor bHLH126 79 167 - -
Acco01g0304 268 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 77 261 - -
Acco01g0304 268 CDD bHLH_AtORG2_like 90 163 - -
Acco01g0304 268 Pfam Helix-loop-helix DNA-binding domain 91 140 IPR011598 GO:0046983
Acco01g0304 268 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 87 139 IPR011598 GO:0046983
Acco01g0304 268 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 86 155 IPR036638 GO:0046983
Acco01g0304 268 Coils Coil 122 159 - -
Acco01g0304 268 Gene3D - 78 167 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0304 Acco-ChrAcco01 3566726 3568220 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0304 92 258 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 42.262 3.13e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco01g0304 HLH 6.4e-07 No_clan