Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0303 ATGTTTCCTTCACAACAACGAGGCAACAATGAGAGGGTCATCGAATTTTCTAGCCGTCCCCACCACCACCAGCAGAAAATCTCAGAGGATCTCATTCTGGACGCCGGCCATGCTCATTATCATCATGCATCTCTGGACATCATCAATTTCTCCGATAAAAAATCACAAAGTATTAGTACCAACAAGCTCCTTTGTGAATCTACAGTAGTTAGTGATAAGATTAACCATTATCGAAATTCTGATAAAAAGGACTACAAGAAGAAGAACGAGAAACTCATTCACAGAGAAATCGAGAGGCAAAGAAGGCAAGAAATGGCTACTCTCTATGCTTCCCTTAGATCTCTTCTTCCACTCGAGTTCATCAAGGGGAAGCGTTCGATGTCAGATCACATGAATGAAGCGAAGAACTACATAAAGCACCTGCAAAAGAGAATCAAAGAACTGAGCACTAAGAGAGATGAACTGAAGAAACTAGCAGAGACTAATTCTTTGAATCCAGAAGAAACACACGAGTGCGAAAAGTACACATATAGCGGCTTTTTCAGTGTTCACGAGATTAATAACAATAATGTTGGTGTTGGAATAGAAGTTTCTAGTTCCTTCAGAGAGGAAAGGTTGTTTCCCCTTTCAAAATTACTTAAATTGATGCTTGAAGAAGGACTTGGAGTTGTTAATTGTGTCACCAGCCAAATCAATGGAAGATTAATTCACAGTGTTCAGTGTGAGGTTACTAACAGTTCCGACGACCGTGCAGACCTACCCGCGCTGAGAAGGAAGATTGTCAATCTAGTCCCATCATTTAAATGTTCTGATTAA 816 0.4032 MFPSQQRGNNERVIEFSSRPHHHQQKISEDLILDAGHAHYHHASLDIINFSDKKSQSISTNKLLCESTVVSDKINHYRNSDKKDYKKKNEKLIHREIERQRRQEMATLYASLRSLLPLEFIKGKRSMSDHMNEAKNYIKHLQKRIKELSTKRDELKKLAETNSLNPEETHECEKYTYSGFFSVHEINNNNVGVGIEVSSSFREERLFPLSKLLKLMLEEGLGVVNCVTSQINGRLIHSVQCEVTNSSDDRADLPALRRKIVNLVPSFKCSD 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0303 271 Gene3D - 79 173 IPR036638 GO:0046983
Acco01g0303 271 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 89 141 IPR011598 GO:0046983
Acco01g0303 271 MobiDBLite consensus disorder prediction 1 22 - -
Acco01g0303 271 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 70 263 - -
Acco01g0303 271 Pfam Helix-loop-helix DNA-binding domain 93 142 IPR011598 GO:0046983
Acco01g0303 271 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 87 157 IPR036638 GO:0046983
Acco01g0303 271 FunFam Transcription factor bHLH126 81 169 - -
Acco01g0303 271 CDD bHLH_AtORG2_like 92 158 - -
Acco01g0303 271 Coils Coil 131 158 - -
Acco01g0303 271 SMART finulus 95 147 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0303 Acco-ChrAcco01 3505346 3506677 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0303 90 263 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 43.820 2.87e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco01g0303 HLH 5.6e-09 No_clan